Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 312 a.a., substrate-binding domain-containing protein from Dickeya dadantii 3937

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 69/249 (27%), Positives = 121/249 (48%), Gaps = 11/249 (4%)

Query: 55  AVKDGTVQLTVFDGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVV 114
           A K+  V L V D    +  Q   +EN +T+     +  P D  A  G V       + V
Sbjct: 49  AAKELGVNLQVLDSQGSSPKQVADLENAITRGAQGFVVSPNDVNAVSGAVTEIQDAKLPV 108

Query: 115 IASNTKV-ADASVPYVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKGE 173
           +  +  V  D  VP+ G ++ +GG+  A  +  +     ++V++ G  G S+ I+R +G 
Sbjct: 109 VTLDRSVKTDKKVPHFGANNYKGGQAIADFVKARFPNGADIVLLTGQPGSSSNIERTQGI 168

Query: 174 LEVL-GKHPDIKIIEKKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALK 232
            + L       +++  +T NW R++ + + E  L + PK    +++ NDDMALGA++AL+
Sbjct: 169 RDSLKAGGSKYRLVADQTGNWMRSEGMRIVESVLPSLPKRPQVILSANDDMALGAIEALQ 228

Query: 233 SHGLTSKDVPVTSIDGMPDAIQAAKKDEVTTFLQD-------AQAQSQGALDVALRA-LA 284
           S GL   +V VT  D +P+A+ A  +D   +   D        QA +Q   ++  ++ + 
Sbjct: 229 SQGLKPGEVMVTGFDAVPEAL-ARVRDGWLSVTADQRPGYAVTQAMTQLTNNIRTKSPIT 287

Query: 285 GKDYKPQSV 293
           G DY P  +
Sbjct: 288 GADYPPTMI 296