Pairwise Alignments

Query, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 307 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score =  137 bits (346), Expect = 3e-37
 Identities = 83/250 (33%), Positives = 137/250 (54%), Gaps = 13/250 (5%)

Query: 55  AVKDGTVQLTVFDGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVV 114
           A +D  ++L V D   D   Q NQ++N +    DAI+   +D  A     KAA +  + +
Sbjct: 46  AGRDKNIELLVEDAQLDPSKQLNQVQNFIANGVDAIIVNAVDGDATAAITKAASAAKIPL 105

Query: 115 IASNTKVADASV------PYVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQID 168
           +  N   A+          +VG+++++ G ++A+A    + GKG  VI+ GP+   A + 
Sbjct: 106 VYVNHPPAELETGLPDGTAFVGSNELDSGTMEAEAACKLMGGKGKAVILMGPLENHAALV 165

Query: 169 REKGELEVLGKHPD--IKIIEKKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALG 226
           R K ++E +   P+  I+I+EK+TANW R QA  L   WL A  +  + VIA ND+MA+G
Sbjct: 166 RTK-DVETVFSKPECKIEILEKQTANWSRTQAQDLVSSWLTAGIQ-FDAVIANNDEMAIG 223

Query: 227 AVQALKSHGLTSKDVPVTSIDGMPDAIQAAKKDEV-TTFLQDAQAQSQGALDVALRALAG 285
           A QALK+ G++ KDV +  ID  PD + A +  ++  T  Q+A  Q + ++  A++A AG
Sbjct: 224 AAQALKAAGVSMKDVVIAGIDATPDGLAAMQAGDLDITVYQNATKQGEVSVQTAVKAAAG 283

Query: 286 KDYKPQSVIW 295
           +    +  +W
Sbjct: 284 Q--STEKTLW 291