Pairwise Alignments

Query, 251 a.a., short-chain dehydrogenase from Pseudomonas simiae WCS417

Subject, 253 a.a., 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD from Escherichia coli ECOR38

 Score =  150 bits (380), Expect = 2e-41
 Identities = 88/247 (35%), Positives = 145/247 (58%), Gaps = 7/247 (2%)

Query: 8   AFDLTGHCAVITGGAAGIGLACASLLVERGARVA---LLDRDPAVVEVAAGLGAGHLGIA 64
           AF L G  AV+TG   G+G   A  L + G  +    +++    + +V A LG   L + 
Sbjct: 5   AFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVEPTETIKQVTA-LGRRFLSLT 63

Query: 65  VDLGQIGQIQHTIDTVFAHFQRLDYLINSAGVVLLDKAVDVSESAWDTTLDINLKASFFV 124
            DL +I  I   +D   A F  +D L+N+AG++  + A++ SE  WD  +++N+K+ FF+
Sbjct: 64  ADLRKIDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFM 123

Query: 125 AQACARHMLAQGS-GRIVNLASQAAVIGLDRHVAYCASKAAIVGMTKVLAMEWAP-QINV 182
           +QA A+H +AQG+ G+I+N+AS  +  G  R  +Y ASK+ ++G+T+++A EWA   INV
Sbjct: 124 SQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINV 183

Query: 183 NAISPTIVETALGKKAWAGEVGEKAKL-QIPAGRFAQPEEIAGLALYLLSDAAQMITGAN 241
           NAI+P  + T   ++  A E      L +IPAGR+  P ++ G  ++L S A+  + G  
Sbjct: 184 NAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYVNGYT 243

Query: 242 MVIDGGY 248
           + +DGG+
Sbjct: 244 IAVDGGW 250