Pairwise Alignments

Query, 192 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 204 a.a., RNA polymerase sigma factor RpoE from Rhodanobacter sp000427505 FW510-R12

 Score = 78.2 bits (191), Expect = 9e-20
 Identities = 55/186 (29%), Positives = 95/186 (51%), Gaps = 12/186 (6%)

Query: 3   DSDPDVELLVRIGNNDPAAVNEMVTRKLPRLLALASRILGDADEAKDVAQESFLRIWRQA 62
           +++ D  L+ R+   D  A + +V +   +++ L SR +    E +D+AQESF+R WR  
Sbjct: 10  ENELDRALVERVQQGDRRAFDLLVRKYQHKVIGLVSRYVRTHAECEDIAQESFIRAWRAI 69

Query: 63  ASWRSGEARFDTWLHRVALNLCHDRLRRRKQRPLS------EEEVL----ELADSAAPLD 112
            S+R G++ F TWL+++A+N   + L    +RP S      E E +     + DSA P +
Sbjct: 70  GSFR-GDSAFYTWLYKIAVNTAKNHLVAMGRRPPSGDIDADEAEFMAGAERMHDSATP-E 127

Query: 113 EQLESADRSARMAAALAALPERQREAIVLQYYQELSNIDAAALMNISVEALESLLSRARR 172
            +L   +    + + + +LPE  R AI L+    LS  + A  M   +  + S + RAR 
Sbjct: 128 RELMRQEIEQSVFSTVQSLPEELRTAITLREVDGLSYDEIAEAMGCPIGTVRSRIFRARE 187

Query: 173 QLRSQL 178
            +  +L
Sbjct: 188 AIDEKL 193