Pairwise Alignments

Query, 192 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 192 a.a., sigma-70 family RNA polymerase sigma factor from Rhodanobacter sp000427505 FW510-R12

 Score = 69.7 bits (169), Expect = 3e-17
 Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 6/187 (3%)

Query: 4   SDPDVELLVRIGNNDPAAVNEMVTRKLPRLLALASRILGDADEAKDVAQESFLRIWRQAA 63
           SDPD EL+  +  N P A   +V         +  R++ + ++A+++ Q++FLR+ +   
Sbjct: 6   SDPDRELVDAVLANRPGAFERLVREYQGLCWHIIQRMVRNPEDARELCQDTFLRVHQCLH 65

Query: 64  SWRSGEARFDTWLHRVAL-----NLCHDRLRRRKQRPLSEEEVLELADSAAPLDEQLESA 118
            +R GE+   +W+ RVA      +L H R+   +    ++  ++E       L+     A
Sbjct: 66  QYR-GESALKSWIGRVAYTIALRHLQHKRIALVEPGADNDFALVENLGDGFDLEAACADA 124

Query: 119 DRSARMAAALAALPERQREAIVLQYYQELSNIDAAALMNISVEALESLLSRARRQLRSQL 178
           + +  + AA+ ALP  QR  + L Y +E +  + A +  ++   ++S L R+R +LR  L
Sbjct: 125 ETARHLHAAIEALPPLQRTLLTLYYLEETTIPEIAQITGLASGTIKSHLFRSRLRLRGAL 184

Query: 179 ADTSGLA 185
              +G+A
Sbjct: 185 EARTGVA 191