Pairwise Alignments

Query, 192 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 179 a.a., RNA polymerase subunit sigma from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 67.0 bits (162), Expect = 2e-16
 Identities = 46/167 (27%), Positives = 88/167 (52%), Gaps = 14/167 (8%)

Query: 7   DVELLVRIGNNDPA--AVNEMVTRKLPRLLALASRILGDADEAKDVAQESFLRIWRQAAS 64
           D ELL +    +    A N++V +   ++     +++ D D+A D+ QE FL++W+   +
Sbjct: 3   DKELLEKFAQPESRNMAFNQLVRKYQQKIYWHIRKMVIDHDDADDLTQEVFLKVWKNLDN 62

Query: 65  WRSGEARFDTWLHRVALNLCHDRLRRRKQRPLSEEEVLELADSAAPLDEQLESADRSA-- 122
           +R  +A+  TW++R+A N C   L  +K+R       L L D  A L E++ S+   A  
Sbjct: 63  FRQ-DAQLYTWIYRIATNECLSFLSSKKRR-----FFLPLNDVTAELMEKVASSPDLAGD 116

Query: 123 ----RMAAALAALPERQREAIVLQYYQELSNIDAAALMNISVEALES 165
               ++  A+  LP++QR    ++Y+ E+   + + ++  SV AL++
Sbjct: 117 EVQQKLQKAILRLPDKQRLVFNMKYFDEMKYEEMSQILGTSVGALKA 163