Pairwise Alignments

Query, 192 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 200 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 63.2 bits (152), Expect = 3e-15
 Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 10/180 (5%)

Query: 7   DVELLVRIGNNDPAAVNEMVTRKLPRLLALASRILGDADEAKDVAQESFLRIWRQAASWR 66
           D EL+ +  N   AA   +V +   R+      I+ D   A+D+ Q+ F+++ +   S R
Sbjct: 9   DSELIAQYRNGSEAAFEVLVDKYKSRVFTTIYMIVKDQGLAEDLLQDVFVKVIQTLNSDR 68

Query: 67  -SGEARFDTWLHRVALNLCHDRLRRRKQRPLSEEE-------VLELADSAAPLDEQLESA 118
            + E +F  WL R+A NL  D  R+ K+ P    E        L+ ADS   +++Q    
Sbjct: 69  YNEEGKFQPWLMRIAHNLAVDYFRKMKRYPFIMMEDGSNLFNTLKFADS--NVEDQQVKD 126

Query: 119 DRSARMAAALAALPERQREAIVLQYYQELSNIDAAALMNISVEALESLLSRARRQLRSQL 178
           +  A +   +  LPE Q++ +++++Y +LS  + A    +S+      +  A   +R +L
Sbjct: 127 ETHALVRDLIDELPESQKQVLIMRHYMDLSFQEIADQTGVSINTALGRMRYALINMRKKL 186