Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 809 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  595 bits (1533), Expect = e-174
 Identities = 336/839 (40%), Positives = 489/839 (58%), Gaps = 51/839 (6%)

Query: 8   LHPLALSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAGLVLAFD 67
           L P  L++A+A +A PL +     AE++SS V  +++PA  L+  LN +A Q GL L   
Sbjct: 9   LRPSLLAMAIALSA-PLASTSLIAAEQASS-VRTYNLPAAPLATTLNQIASQGGLALTLS 66

Query: 68  ASLTRGKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGAMELQATTI 127
            +L  GK S  + GQ+D   AL + L G+GLQ  + SA  Y L  +P+  G + L  T I
Sbjct: 67  PALASGKTSAPVQGQFDAPAALREALRGTGLQLEQSSAGTYSLVPVPE--GVLALPTTNI 124

Query: 128 SGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQILRY 187
           +G    ES  GPV GY+A R+ +GTKTDTAL+E P+SIS+ T++QM+ +N ++L+  ++Y
Sbjct: 125 TGQDSYESAWGPVDGYLAKRTAAGTKTDTALVEAPRSISVATREQMQDRNVQNLDDAVKY 184

Query: 188 SAAVIPETRGATASRLDQLTIRGFSPATYLDGLRMPSSRDALPQKDAFDLERVEVLRGPA 247
              ++  + G+  +R D + +RGF P  +LDGL +P    A P+ + ++L+R+ +LRGPA
Sbjct: 185 MPGIVSASYGSD-TRYDWMRVRGFEPTQFLDGLPLPRGVYANPKAETWNLDRLALLRGPA 243

Query: 248 SVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDDQGVYSYRVAG 307
           S +YGQ  P G+++MVS+RP     + V V+YG+ N ++  F  +G +DD+G + Y ++G
Sbjct: 244 SSVYGQTPPGGLLDMVSRRPSAESSNAVQVQYGSDNYRQINFASTGKIDDEGQFLYGLSG 303

Query: 308 LFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYGSVPAWGSVLHS 367
           +  DA  QV+H + +R +++ + TW  D+ T LT L  F +D  GA+   +P  G+ + S
Sbjct: 304 VVRDAGTQVDHIDNKRYNIAPSLTWNIDNDTKLTFLSQFTRDDTGATSQFLPIVGTKIKS 363

Query: 368 PTGRSIDVDFYD--GEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSEGQYRSL- 424
           P G   DV  +   G+ ++E  DR YY++G+AFEH F+D W  RQN RY +SE  ++ L 
Sbjct: 364 PLG---DVSHHKNLGDPDYEFYDRTYYALGYAFEHRFNDTWQFRQNLRYTKSELSFQQLT 420

Query: 425 ---YSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDYQNTSTD 481
              Y+ Y +     I R++   D ++  + +DN  QA F TG + HTLL+GLD+Q T T 
Sbjct: 421 VGAYAYYPVDAAGNIDRTSTNVDENIGQFAVDNNFQADFSTGDVTHTLLLGLDHQRTDTS 480

Query: 482 TLSGSGVYTAGPTLDIFNPVYGAAVPVPAYTT---DGTSRSEQTGVYLQEQMKWDKWVLL 538
            LS   +Y +   ++IFNPV    V  PA      D   ++ QTG+Y+Q+QM  D W L 
Sbjct: 481 YLS---IYGSAGRVNIFNPVNTTPVVRPARADAYYDYNQKTVQTGLYVQDQMALDNWRLT 537

Query: 539 LGGRYDWASTDNSTQTLSSGAKSKSSLD-SKAFTGRIGLVYLFDNGLAPYASYAESFNPQ 597
           LGGR DW        T     K  ++ D SK F+G   L Y+FD+G  PY SYAESF P 
Sbjct: 538 LGGREDWVHQG----TTYFNKKDVTNTDRSKNFSGNAALSYVFDSGFVPYLSYAESFQPA 593

Query: 598 SGTGYGG-SVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLCGTG 656
           S         +KPTEGKQ+E+GIKYQPPGSN+ ++AA++DL Q NVL T        G  
Sbjct: 594 SNASVDPLKSYKPTEGKQWELGIKYQPPGSNTLLSAAVYDLTQKNVLVTSTG----AGGQ 649

Query: 657 RCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDIGVGPAI 716
               Q GEV+ +G ELE  + + +NL + AAY    + + K                   
Sbjct: 650 SVTDQTGEVKVKGLELEAVSDVTENLKVIAAYTLAKSEVQKGE----------------- 692

Query: 717 AAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTL--KVPGYTL 774
             +G     +P   AS W DYT H G L GFG+G GARY G+++GD  NT   K   YT+
Sbjct: 693 -FKGNRLQLMPNQQASLWTDYTWHTGVLDGFGIGFGARYTGNTYGDQGNTWLGKANAYTV 751

Query: 775 FDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASATYQW 833
           FD AVHYD+  +        + LNATNL NK+Y+++C   S+C++G QR+V ASATYQW
Sbjct: 752 FDGAVHYDLGRLDNTLKGASIKLNATNLFNKDYISTC-DGSYCYFGDQRSVVASATYQW 809