Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 705 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  342 bits (878), Expect = 3e-98
 Identities = 238/721 (33%), Positives = 362/721 (50%), Gaps = 56/721 (7%)

Query: 120 MELQATTISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAE 179
           +ELQAT+I+G    E+  GPV GY ATRS S T+TDT++ ETPQSIS+V+KD +    A 
Sbjct: 30  IELQATSITGTADYETAQGPVQGYHATRSASATRTDTSIHETPQSISVVSKDVVEDIGAT 89

Query: 180 SLNQILRYSAAVIPETRGATASRLDQLTIRGFSPAT-YLDGLRMPSSRDALPQKDAFDLE 238
            L   L Y+  V           L   T+RGF+    Y +G   P +R      DA  +E
Sbjct: 90  RLQDALDYAGGV-GRANNFGGQGLTTFTVRGFTTGEFYRNGF--PINRGYPNMPDANTIE 146

Query: 239 RVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDDQ 298
           R+EVLRGPA++LYG+G P G  N+VSK+PL  P   +G +      +R T D SGP+D+Q
Sbjct: 147 RLEVLRGPATMLYGRGDPGGTFNVVSKQPLAEPTVTLGSQLDDQGMQRATLDASGPLDEQ 206

Query: 299 GVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYGSV 358
           G  +YR+  + +  +   +H ET R  ++   TW+  D T +   G F ++         
Sbjct: 207 GRLAYRLNVVGEGGETFRDHVETERYGVTPVITWQATDDTKVIFEGDFMRNNHPLDR--- 263

Query: 359 PAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSE 418
              G    +    +   D + G+K+  K   +       FEH  +D WT+    ++L   
Sbjct: 264 ---GLTRFTNQKGTASRDTFWGDKDVGKLHNDNNMAQLRFEHLLNDNWTLGGGFQWLDGT 320

Query: 419 GQYRSLYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDYQNT 478
            Q  ++ +N L AD  T+ R+     ++         +   F TG   HTLL G+++++ 
Sbjct: 321 LQGNAIEANSLAADGHTLNRNFNYRKLEWTDKDAQLNLTGHFSTGAFDHTLLTGVEFEDY 380

Query: 479 STDTL--SGSGVYTAGPTLDIFNPVYGAAVPVPAYTTDGTSRSEQTGVY---LQEQMK-W 532
              ++    S  YT+    DIFNPVYG   P PA T+  T   E    Y   +Q+Q+   
Sbjct: 381 DYKSIIQRSSAAYTS----DIFNPVYGK--PRPALTSTPTHDKENLKTYSAFIQDQVALT 434

Query: 533 DKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAE 592
           ++  +L G R++    ++  +T  +G K+  + D+ + T R+G +Y   + LA YA  A 
Sbjct: 435 ERLKVLAGARFE--RFEHEYETYVAGGKNWKASDN-SVTPRVGAIYDLTDTLAIYADAAR 491

Query: 593 SFNPQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDP-DPTH 651
           SF P +G   GG  F+P +GK YE+GIK++       + AAI+ + + NVLTTDP DP  
Sbjct: 492 SFKPNTGASSGGVGFEPEKGKSYEMGIKWEGLDRQLSVDAAIYQIDKKNVLTTDPLDPNS 551

Query: 652 LCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDIG 711
                      G+V+SRGF+L    +L     +   YAYLD  ++K +NT+R        
Sbjct: 552 KVAA-------GQVRSRGFDLNVAGNLTPEWRVIGGYAYLDAEVTK-DNTIR-------- 595

Query: 712 VGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANT-LKVP 770
           VG  +A        +PR++ S    Y   DG LKG G+GAGA+YV    G T+NT   + 
Sbjct: 596 VGSRLA-------NIPRNSFSLLNVYEFQDGSLKGLGLGAGAKYVDERVGQTSNTPFSMD 648

Query: 771 GYTLFDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASAT 830
            Y + D   +Y      ++ D +RL L+  NL N+++    +   + + G  RTVQ    
Sbjct: 649 AYAVVDLLSYY------KVNDKVRLNLDVKNLFNRDFEEGAFGNFYAYPGEPRTVQVGIA 702

Query: 831 Y 831
           Y
Sbjct: 703 Y 703