Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 827 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  256 bits (653), Expect = 5e-72
 Identities = 241/867 (27%), Positives = 381/867 (43%), Gaps = 93/867 (10%)

Query: 2   SRLARPLHPLALSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAG 61
           S L R +    L V ++ +A+P+  +  T A ++ +    ++I AG L+ AL+  A QAG
Sbjct: 9   SPLKRAVQAALLGVCLS-SALPVAVMAETPASDTQAR--DWNIAAGALATALDQFARQAG 65

Query: 62  LVLAFDASLTRGKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGAME 121
           + L++DA+   GK S GLSG++D+  AL QLL G GLQA +     + L     + G++ 
Sbjct: 66  ISLSYDATSVAGKTSPGLSGRFDSQQALEQLLRGQGLQAQRQGNSTWMLLPQVADTGSLN 125

Query: 122 LQATTISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESL 181
           L AT I+G     +  G  +G   T +++  K + +L ETPQS+S++T+  M  QN  ++
Sbjct: 126 LGATLINGERLGATTDG--TGSYTTGAVTIGKGEHSLRETPQSVSVMTRQFMDDQNVTTI 183

Query: 182 NQILRYSAAVIPETRGATASRLDQLTIRGFS--PATYLDGLRMPSSRDALPQKDAFD--- 236
           + ++  +  +   T   +         RGF        DG+ +   +D + Q D+F    
Sbjct: 184 DDVMERTPGI---TTYESPMGGKYFYSRGFKMLGQYQYDGVPLDMGKDYV-QADSFSANM 239

Query: 237 --LERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGP 294
              +RVEVL+G A +L G GT SG +N V KRP   P   + +  GT++  R   D  GP
Sbjct: 240 AIYDRVEVLKGAAGMLKGAGTASGAVNFVRKRPQAKPTTSLSLSAGTWDNYRADVDTGGP 299

Query: 295 MDDQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGAS 354
           ++D G    R A         ++  + + Q+   A  +   D T  T LG       GAS
Sbjct: 300 LNDSGTLRGRAAVSQQTRGSYMDIAKRQDQAFYGALDF---DLTPDTTLG------VGAS 350

Query: 355 YGSV---PAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAF----EHHFDDVWT 407
           Y  V   P WG +     G+S ++          +S  ++ S    F     HHF+D W 
Sbjct: 351 YEDVDATPCWGGLPRYADGKSANL---SRSTCLGQSWNDWQSRRTTFFADVTHHFNDDWK 407

Query: 408 VR---------QNARYLRSEGQYRSLYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQA 458
           ++         Q+ +Y  SEG     Y N       T        D D   + LD  V  
Sbjct: 408 LKVAAVHSRNLQDTKYAASEGTIN--YGN----PAPTANSYAALMDYDHKDFGLDAYVDG 461

Query: 459 KFDTGPLQHTLLMGLDYQNTSTDTLSGSGVYTAGPTLDIFNPVYGAAVP-----VPAYTT 513
           KF+   L+H L++G +    + D +    +        I+ P +    P      P    
Sbjct: 462 KFEAFGLEHELILGANGSRGTQDDV--YAIQNLPKRQSIYQPDHHFPEPDDNTFWPNMYR 519

Query: 514 DGTSR--SEQTGVYLQEQMKW-DKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAF 570
            GT +  + Q G Y   +++  +  + ++G R  W      +  L+ G  +     +K  
Sbjct: 520 GGTVKETATQYGTYATLRLRLAEPLMFIVGSRVSWYENRRQSNNLAWGEWAVQDARTKE- 578

Query: 571 TGRI----GLVYLFDNGLAPYASYAESFNPQSG-TGYGGSVFKPTEGKQYEIGIKYQPPG 625
           TG +     L+Y  D  L+ YASYA+ F PQS      G+  KP  G  YE+GIK +   
Sbjct: 579 TGEVTPFAALIYDLDEHLSVYASYADIFQPQSSYATVDGAALKPKIGDNYELGIKGEWFD 638

Query: 626 SNSFITAAIFDLRQTNVLTTDPDPTHLCGT---GRCQSQDGEVQSRGFELEGKASLNDNL 682
                + A+F   + N    + D T +C T   G C +  G+V+++G E E    L + L
Sbjct: 639 GRLNSSVALFRAIEKN--GAESDYTTMCPTSADGYCYTDTGKVRAQGVETEISGELLERL 696

Query: 683 DITAAYAYLDNRISKSNNTVRYAPISDIGVGPAIAAEGTTTYGVPRHTASAWADYTVHDG 742
            +   Y Y   +  K+             +   +    + TY VPRH    W DY + DG
Sbjct: 697 QLFGGYTYTQTKSLKN-------------IDSQVEGGSSNTY-VPRHMLRLWGDYQL-DG 741

Query: 743 KLKGFGVGAGARYVGSSWGDTANTLKVPGYTLFDAAVHYDIPNIARLKDNLRLALNATNL 802
            L  + VGAG     S++      L+  GY  + A + Y      R+ D   +ALN  NL
Sbjct: 742 ALAKWSVGAGVNAQSSNYRVQTIKLEQAGYATWSARMAY------RIDDTWTVALNGNNL 795

Query: 803 ANKEYVASCYSYSW-CWYGSQRTVQAS 828
            +K Y  +  + SW  +YG  R    S
Sbjct: 796 FDKSYYNTVGTASWGNFYGEPRNFTVS 822