Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 797 a.a., Outer membrane ferrichrome-iron receptor from Pseudomonas putida KT2440

 Score =  343 bits (880), Expect = 2e-98
 Identities = 258/844 (30%), Positives = 417/844 (49%), Gaps = 72/844 (8%)

Query: 4   LARPLHPLALSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAGLV 63
           L+R LH   L +A++  A+P L  Q  +A+ ++  + ++SIPAG L+ AL+  A +AG+ 
Sbjct: 12  LSRALHAALLGLAVSTYALPSLA-QPLNADHNNP-LKQWSIPAGPLAPALDRFAREAGIS 69

Query: 64  LAFDASLTRGKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGAMELQ 123
           L+FDA     + + G+ G  DT  AL+ LL G+ LQ      + Y +   P   G +EL 
Sbjct: 70  LSFDAQNVANRNTNGVQGALDTRSALSSLLRGTELQIEPQGPNAYLVIPQPKPAGPLELG 129

Query: 124 AT-------TISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQ 176
            T        I  A    S     +  VA     G K  T+++ TP S+S+VT  +M+ +
Sbjct: 130 VTEDYRLAPVIINAKVKASADDDANSVVAKELWVGGKVATSILNTPASVSVVTNKEMQQR 189

Query: 177 NAESLNQILRYSAAVIPETRGATASRLDQLTIRGFSPATYLDGLRMPSSRDALPQKDAFD 236
           +  +  + L+Y+  V+ +  G+   R D   IRGF   TY DGL + S R    ++D + 
Sbjct: 190 SVSTTEEALQYTPGVVSDYYGSD-DRNDYFLIRGFQATTYRDGLTLSSMRGV--REDPYA 246

Query: 237 LERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMD 296
            ER+E+LRG  S L+G   P G +N V+K+P    F +  V YG+++   T  D+   ++
Sbjct: 247 YERIEILRGANSTLFGPADPGGSVNFVTKQPRFEKFGQGYVTYGSYDHAETGIDVGDALN 306

Query: 297 DQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYG 356
           D+   + R      ++D + +H++   + +    TW P D TS T++  + K     + G
Sbjct: 307 DEQTLAGRFTAKMQNSDREYDHSQDDNRFVMGGLTWAPTDFTSATVVLDYLKTNSSPNSG 366

Query: 357 SVPAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLR 416
             P     L     RS   DFY GE  +   D E  S+     H FD+ +T+R N RY  
Sbjct: 367 GYP-----LDKGYDRS---DFY-GEPGYNFHDVERTSLSGNITHDFDNGFTLRSNLRYSE 417

Query: 417 SEGQYRSLY-SNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDY 475
               +  +Y S+       TI R    +D D D    +  +Q       +  + L+G++Y
Sbjct: 418 LTDDFGYVYLSDNASRVGTTIPRYVFGTDSDADQLNGNLMLQYDAQFEHIDSSTLVGVEY 477

Query: 476 QNTSTDTLSGSGVYTAGPTLDIFNPVY----GAAVPVPAYTTDGTSRSEQTGVYLQEQMK 531
            +++T     S VY+  P++DI NPV+    G   P      D T+++    V+LQ+ + 
Sbjct: 478 LDSTT---KQSSVYSLAPSIDIANPVFTGVPGGITPYTRKKNDATTKA----VFLQQNLS 530

Query: 532 -WDKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASY 590
            +D+ +   G R D  S D S++    G +++    S+  + R  L Y+ ++ ++ Y S 
Sbjct: 531 FFDRVIATAGVRND--SMDLSSKEYIGGEQTEKDNFSET-SYRAALTYIVNDEVSTYVSM 587

Query: 591 AESFN-PQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDP 649
            ES + PQ G         P  GKQYE+GIKY P G ++  +AA++DL Q NV      P
Sbjct: 588 VESVSPPQVGV-------TPQTGKQYEVGIKYSPMGMDALFSAAVYDLTQENVTIAVVLP 640

Query: 650 THLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISD 709
           + +      Q   GE + RG +LE KA +  ++ +  AY+Y+++ + + +          
Sbjct: 641 SGIIE----QQTVGESRVRGLDLEAKAQVTQDISVIGAYSYMESEVLRGS---------- 686

Query: 710 IGVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTLKV 769
           +  G ++     TT   P+HTAS W+ Y +    +    VG GARYVG+ + D ANT K 
Sbjct: 687 LYDGSSLKGNEFTT--APKHTASLWSYYDIPGTDV---SVGLGARYVGAYYMDAANTKKS 741

Query: 770 PGYTLFDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASA 829
            G TLFDAA++Y    IA+  D   LALN +NL ++++V    S +  +Y   R V A  
Sbjct: 742 DGTTLFDAALNY---KIAKGTD---LALNVSNLFDEQHVVG--SGTANYYNPGREVTAKV 793

Query: 830 TYQW 833
           +Y W
Sbjct: 794 SYSW 797