Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 796 a.a., putative Outer membrane ferric siderophore receptor from Pseudomonas putida KT2440

 Score =  239 bits (610), Expect = 5e-67
 Identities = 243/853 (28%), Positives = 372/853 (43%), Gaps = 102/853 (11%)

Query: 13  LSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAGLVLAFDASLTR 72
           L+   AFA  PL T     A E   A   F+ PA  L+QALN+ +   G  + +   L  
Sbjct: 14  LAALPAFAVAPLAT-----AAEQLQAYA-FAQPAQPLAQALNAFSRTTGQSVVYTLELP- 66

Query: 73  GKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGAMELQATTISGAYQ 132
           G ++  L+G++  + AL QLL  +GL   ++ A    LE   D  GA+ LQATT++    
Sbjct: 67  GVQAPALNGRFSAEQALQQLLGNAGLAWRRVDARTLTLEPA-DTSGALSLQATTVTSQLD 125

Query: 133 AESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQILRYSAAVI 192
             S   P S  +      G   D      PQ+I++V    +R Q   +L+  L   + + 
Sbjct: 126 DYSYQPPASASIMRGQ--GPNQDI-----PQAINVVPAQVIRDQAPRNLDDALANVSGIT 178

Query: 193 PETRGATASRLDQLTIRGFSPATYLDGLRMPSSRDALPQKDAFDL----ERVEVLRGPAS 248
                   S  D +  RGF      DG  M   RD +P     +L    ERVEVL+GPAS
Sbjct: 179 QGNNFGGTS--DTVMKRGFGDNR--DGSIM---RDGMPVVQGRNLNASTERVEVLKGPAS 231

Query: 249 VLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTF----NKKRTTFDLSGPMDDQGVYSYR 304
           +LYG   P GVIN+VSKRP    ++ + V   T+    N      D +G + D   ++YR
Sbjct: 232 LLYGIQDPGGVINVVSKRPQLQQYNALTVRGSTYGSGKNGSGGGLDSTGALGDSN-FAYR 290

Query: 305 VAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGH---FQKDPKGASYGSVPAW 361
           +    +D D    +   R   ++ +  W  +D   +    H        +G ++G+    
Sbjct: 291 LVVDHEDEDYWRNYGVHRESLVAPSLAWLGEDTQVVLAYEHREFLYPFDRGTAFGNN--- 347

Query: 362 GSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSEGQY 421
           G  L+ P  R +D  F D E    +SD     +    +H   D W +     + R     
Sbjct: 348 GHPLNIPATRRLDEPFNDME---GRSDLYRLEV----DHQLADDWKLHFGYSFNRETYDA 400

Query: 422 RSLYSNYLMADYRTIRRSTIASDVDLDAYTLDN----QVQAKFDTGPLQHTLLMGLDYQN 477
             +    +     T+ RS    D   +A + D      +    +   +QH LL G+D+++
Sbjct: 401 SQVRVTGVNETQGTLTRSI---DGTHNAMSRDQFVTLSLNGNVELAGMQHDLLFGIDHED 457

Query: 478 TSTDTLSGSGV-YTAGPTLDIFNPVYGAAVP---VPAYTTDGTSRSEQTGVYLQEQMKWD 533
                  G  +  T   T    +PVYG  V    V A  +D T +     +++Q+ +  D
Sbjct: 458 RK--IFRGDLIRQTPQSTFSYLDPVYGQEVEGTNVRASDSDQTDKLRTDALFVQDALHLD 515

Query: 534 K-WVLLLGGRYDWASTDNSTQTLSSGA--KSKSSLDSKAFTGRIGLVYLFDNGLAPYASY 590
           + W+L+ G R+         Q    G   K+ + +  +A+    G+VY  D+ L+ Y SY
Sbjct: 516 EHWILVAGARF-----QQYDQYAGRGRPFKANTDISGQAWVPHAGIVYKVDDQLSFYGSY 570

Query: 591 AESFNPQS------GTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLT 644
           +ESF P S      G     S   P EGK +E+G K   PG  +  T A+FD+ + NVL 
Sbjct: 571 SESFKPNSTIAPLTGNVVLDSSVAPEEGKAWELGAKLDMPGRITG-TLALFDITKRNVLV 629

Query: 645 TDPDPTHLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRY 704
           ++ D      +    S  GEV SRG EL+    L++   +  +YA  D +++K  +    
Sbjct: 630 SNFDAV---TSETVYSNAGEVSSRGVELDVTGQLSERWSLIGSYALTDAKVTKDPD---- 682

Query: 705 APISDIGVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKG---FGVGAGARYVGSSWG 761
                         EG     V RH+ S  A Y    G L G      GAGARYVG   G
Sbjct: 683 -------------LEGNRLQNVARHSGSLSAVYDF--GSLFGSDRLRFGAGARYVGERSG 727

Query: 762 DTANTLKVPGYTLFDAAVHYDIPNIARLKD-NLRLALNATNLANKEYVASCYSYSWCWYG 820
           +  NT  +P YT+ DA   Y+     +L + N+RL LN  NL +K Y +S  +  +   G
Sbjct: 728 NATNTFDLPSYTVADAFATYE----TKLDEHNVRLQLNVKNLFDKVYYSSAVNQYFVAIG 783

Query: 821 SQRTVQASATYQW 833
             R V  S+T+++
Sbjct: 784 DARQVSLSSTFEF 796