Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 810 a.a., Outer membrane ferrichrome-iron receptor from Pseudomonas putida KT2440

 Score =  593 bits (1530), Expect = e-173
 Identities = 329/838 (39%), Positives = 497/838 (59%), Gaps = 48/838 (5%)

Query: 8   LHPLALSVAMAFAAVPLLTVQSTHAEESSSAVGRFSIPAGDLSQALNSLAEQAGLVLAFD 67
           L P  +++A+  AA PL +     AE+S+S    +++P+  L+  LN +A QAG+ LA D
Sbjct: 9   LRPSLMALAIGLAA-PLTSPALFAAEQSTSRA--YNLPSAPLATTLNQIASQAGIALAID 65

Query: 68  ASLTRGKRSQGLSGQYDTDVALTQLLSGSGLQALKLSADRYRLESIPDNGGAMELQATTI 127
            +L  G+ S  +SGQYD   AL   LSG+GLQ  + SA  Y L ++PD  G + L  TT+
Sbjct: 66  PALVSGRTSAPVSGQYDGLGALQAALSGTGLQLQQSSAGSYSLVAVPD--GTLALPETTV 123

Query: 128 SGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQILRY 187
           +    +ES  GPV GYVA R+ +GTKTDTAL+E P+S+S+ T++QM+ +   SL+  +RY
Sbjct: 124 NATSASESAWGPVEGYVAKRTAAGTKTDTALVEVPRSVSVATREQMKDRGVHSLDDAVRY 183

Query: 188 SAAVIPETRGATASRLDQLTIRGFSPATYLDGLRMPSSRDALPQKDAFDLERVEVLRGPA 247
              ++  + G+  +R D + +RGF P  +LDGL +P    A P+ + ++L+R+ +LRGPA
Sbjct: 184 MPGIVSASFGSD-TRYDWMRVRGFEPTQFLDGLPLPRGVYANPKAETWNLDRLALLRGPA 242

Query: 248 SVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDDQGVYSYRVAG 307
           S +YGQ  P G+++MVS+RP     HE+ ++YG+ N ++  F  +G +DD+G + Y V+G
Sbjct: 243 SSIYGQTPPGGLLDMVSRRPQAESAHEIELQYGSDNHRQINFASTGKIDDEGRFLYGVSG 302

Query: 308 LFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYGSVPAWGSVLHS 367
           +  D+  Q++H + +R +++ + TW  D+ T+LT L  F +D  GA+    P  G+ +  
Sbjct: 303 VIRDSGTQIDHIDNKRYNIAPSLTWNIDEDTTLTFLTQFTRDDTGATSQFRPIQGTKIDM 362

Query: 368 PTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLRSEGQYRSL--- 424
           P G+ I      G+ ++E  DR YY++G+AFEH  +DVW  RQN RY +S+  ++++   
Sbjct: 363 PFGK-ISHHKNLGDPDYEFYDRTYYALGYAFEHRINDVWQFRQNLRYTKSDLSFQTITPG 421

Query: 425 ---YSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDYQNTSTD 481
               S+  + D  T+ R +  +D D+  + +DN  QA F TG + HTLL+GLD+Q  +T+
Sbjct: 422 SYNKSSPPVQDDGTVSRMSTNTDEDISQFAVDNNFQADFATGDIDHTLLIGLDHQRINTN 481

Query: 482 TLSGSGVYTAGPTLDIFNPVYGAAVPVPAYTT---DGTSRSEQTGVYLQEQMKWDKWVLL 538
            LS        P  ++ NPVYG  +  P  +T   D   ++ QTG+Y+Q+QM    W L 
Sbjct: 482 YLSIFDFNV--PDSNVNNPVYGLPITRPDRSTAFYDYNQKTRQTGLYVQDQMALGNWRLT 539

Query: 539 LGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAESFNPQS 598
           LGGR DW  T   T+  + G  + +  D K F+G   + Y+FD+G  PY SYAESF P S
Sbjct: 540 LGGREDWVHT--GTKFFNQGDATNTQRDKK-FSGNAAISYVFDSGFVPYLSYAESFQPSS 596

Query: 599 GTGYGGS-VFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLCGTGR 657
                 S  FKPTEGKQ+E+G+KYQPPGSN+ ++AA++DL Q NV       T+  G   
Sbjct: 597 NASVSASDSFKPTEGKQWELGVKYQPPGSNTLLSAAVYDLTQKNV-----SVTNTVGGVT 651

Query: 658 CQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDIGVGPAIA 717
             SQ GEV+ RG ELE  + + DNL + AAY    + +   +                  
Sbjct: 652 ITSQTGEVKVRGLELEAVSDVTDNLKVIAAYTLAKSEVQDGD------------------ 693

Query: 718 AEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTL--KVPGYTLF 775
            +G     +P   AS W DYT H G L GFG+G GARY G+++GD  NT   K   YT+F
Sbjct: 694 FKGNRLQLMPNQQASIWGDYTWHSGVLDGFGIGLGARYTGNTYGDQGNTYLGKAKAYTVF 753

Query: 776 DAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASATYQW 833
           D +VHYD+  +    +   +A+ ATNL NK+Y+++C SY +C+YG +R+V ASATY++
Sbjct: 754 DGSVHYDLGRLNGSLEGASVAVTATNLLNKDYLSTCDSY-YCYYGDERSVVASATYKF 810