Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 732 a.a., ferrichrome porin FhuA from Serratia liquefaciens MT49

 Score =  548 bits (1413), Expect = e-160
 Identities = 301/730 (41%), Positives = 427/730 (58%), Gaps = 47/730 (6%)

Query: 115 DNGGAMELQATTISGAYQA--ESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQ 172
           D   A + +  T+ G+ Q+  E+  GPV  Y A  S +GTKTDT + +TPQS+S+VT+++
Sbjct: 39  DTKSAAKEETLTVVGSSQSQQENAWGPVGTYAAKHSATGTKTDTPIEKTPQSVSVVTREE 98

Query: 173 MRAQNAESLNQILRYSAAVIPETRGATASRLDQLTIRGFSPA---TYLDGLRMPSSRDAL 229
           M  +  +++   L Y+  V+   RGA+ +  D + IRGFS      YLDGL++     ++
Sbjct: 99  MDMRQPDTVKGALAYTPGVMVGNRGASTA-YDAVNIRGFSSVGTNMYLDGLKLQDDNYSI 157

Query: 230 PQKDAFDLERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTF 289
            Q D + LER EVLRGP+SVLYG+  P GV+ +VSKRP      EV  + GT N  +T F
Sbjct: 158 YQIDPYFLERAEVLRGPSSVLYGKSNPGGVVALVSKRPTTETLREVQFKMGTDNLFQTGF 217

Query: 290 DLSGPMDDQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKD 349
           D  G +DD G+YSYR+ GL  D D Q    +++R +++ +F+WRPDD TSLT L  FQ D
Sbjct: 218 DFGGALDDDGIYSYRLTGLARDEDQQQVGEKSKRYAIAPSFSWRPDDRTSLTFLSSFQDD 277

Query: 350 PKGASYGSVPAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVR 409
           P    YG +P  G+V +   G+ +   F DGE  +    R+   +G+AFEH FDDVWT+R
Sbjct: 278 PSVGFYGWLPKEGTVQNGINGK-LPTSFNDGEPGYNNISRKQQMVGYAFEHGFDDVWTLR 336

Query: 410 QNARYLRSEGQYRSLYSNYLMA-DYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHT 468
           QN RY + +  YRS+Y   + A +   + R  + S   L ++ +D Q QAKF T  + HT
Sbjct: 337 QNLRYSKMDVDYRSIYGQGISATNPAELTRGVMNSKEHLSSFAVDTQAQAKFATAAVDHT 396

Query: 469 LLMGLDYQNTSTDTLSGSGVYTAGPTLDIFNPVYGAAVPVPAYTTDG----TSRSEQTGV 524
           LLMG+DY     D +     Y +  +L++  P YG      +YT  G     +R EQTG+
Sbjct: 397 LLMGVDYMRMRNDVVY---QYGSASSLNVVAPQYGN----QSYTITGGASQVNRQEQTGL 449

Query: 525 YLQEQMKWDKWVLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGL 584
           Y+Q+Q +W+ WVL +GGRYDW+ T NST  L     SK       FTGR GL Y+F+NG+
Sbjct: 450 YVQDQAEWNNWVLTMGGRYDWSDT-NSTNRLKQNLVSKQK--DNEFTGRAGLNYVFENGI 506

Query: 585 APYASYAESFNPQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLT 644
           APY SY+ESF P SGT + G+ F  ++GKQYE G+K+ P       + AI+ L +TN   
Sbjct: 507 APYVSYSESFEPTSGTDFSGNTFAASKGKQYEAGVKFAPKDRPITASIAIYQLTKTNNKV 566

Query: 645 TDPDPTHLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRY 704
            DPDP H           GE++SRG ELEGKA+L  N+++  +Y Y D   +K       
Sbjct: 567 ADPDPDH----SFASVLGGEIRSRGVELEGKAALTANVNLLGSYTYTDAEYTKDT----- 617

Query: 705 APISDIGVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTA 764
                         +G T   +P+H AS WADYT H+  L G  +G+G RYVGSS+GD A
Sbjct: 618 ------------TLQGNTPAAIPKHMASVWADYTFHETALSGLTLGSGVRYVGSSYGDEA 665

Query: 765 NTLKVPGYTLFDAAVHYDIPNIARLK-DNLRLALNATNLANKEYVASCYSYSWCWYGSQR 823
           NT KV  YT+ DAA+ YD   +AR       + +N  NL +KEYV+SC++   C++G++R
Sbjct: 666 NTFKVKDYTVVDAAIKYD---LARFNLPGSSIGINVNNLFDKEYVSSCFATYGCYWGAER 722

Query: 824 TVQASATYQW 833
            V A+AT+++
Sbjct: 723 QVVATATFRF 732