Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 705 a.a., TonB-dependent siderophore receptor from Serratia liquefaciens MT49

 Score =  429 bits (1103), Expect = e-124
 Identities = 252/718 (35%), Positives = 387/718 (53%), Gaps = 50/718 (6%)

Query: 125 TTISGAYQAESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESLNQI 184
           T +  A  A++      GY AT S   TKTD  LI T QS+S+VT+ QM  QN +++N  
Sbjct: 29  TLVVTAKPADTAEAATHGYQATTSQGATKTDKPLILTAQSVSVVTRQQMTDQNTQTVNDA 88

Query: 185 LRYSAAVIPETRGATASRLDQLTIRGFSPA----TYLDGLRMPS---SRDALPQKDAFDL 237
           L+Y++ V     G  A+R D + +RGF       T+LDGLR+ S   + +AL Q D + L
Sbjct: 89  LKYTSGVFTNFAGG-ATRYDTIALRGFHGGDVNNTFLDGLRLLSDGGTYNAL-QVDPWFL 146

Query: 238 ERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMDD 297
           ER++V++GP+SV+YGQ  P G++ + SKRP       V +  G  N +   FD++G + +
Sbjct: 147 ERIDVIKGPSSVMYGQSIPGGLVALTSKRPQFATEGHVNLMAGNNNTQGGAFDVTGALSE 206

Query: 298 QGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYGS 357
           Q  ++YR+ G+   ++   +H    R ++S +  W+PD+ TSL L  + QKDP G  + +
Sbjct: 207 Q--WAYRLTGMTRSSETMYDHQREERYAISPSLLWQPDENTSLLLKAYLQKDPSGGYHSA 264

Query: 358 VPAWGSVLHSPTGRSIDVDFYDGE--KNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYL 415
           VPA GS L+S +G  +   F+DGE  +N  K   + YS  +AF H F+D+W+ RQNA Y 
Sbjct: 265 VPADGS-LYSSSGDKLGRGFFDGESSRNVFKRWEQIYS--YAFSHSFNDIWSFRQNASYT 321

Query: 416 RSEGQYRSLYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDY 475
            S  + + +Y      D+  + R    S   LDA+ +DNQ++A F TG L H +++GLDY
Sbjct: 322 HSNVELQQVYQIGWNDDHSLLNRYYSGSATSLDAFAVDNQLEADFATGLLDHKVMLGLDY 381

Query: 476 QNTSTDTLSGSGVYTAGPTLDIFNPVYGAAVPVPAYTTDGTSRSEQTGVYLQEQMKWDKW 535
           Q    +    S        L+ +  V G         TD   R EQTGVYLQ+++    W
Sbjct: 382 QRLRNNLWDESA---GASQLNPYTGVSGGDALTNLTHTDSRRRYEQTGVYLQDEISLQNW 438

Query: 536 VLLLGGRYDWASTDNSTQTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAESFN 595
            L L GR+D   + N+   L++G     + D+  F+GR  L+Y FDNG +PY SY+ +  
Sbjct: 439 YLNLSGRFDRIESKNTV--LNTGTSDARTDDN--FSGRGSLLYRFDNGFSPYVSYSTAVT 494

Query: 596 PQSGTGYGGSVFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPTHLCGT 655
           P++     G + KP+  +QYE+G+KYQPPGS+S  + A++DL Q +V       ++    
Sbjct: 495 PEALPDQNGHMLKPSTSEQYEVGLKYQPPGSSSIYSVALYDLTQKDVANRVVQQSYYLPA 554

Query: 656 GRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDIGVGPA 715
           G+       V S+G ELE ++ + +  D+ A Y Y         N V++    D      
Sbjct: 555 GK-------VHSQGIELEARSKITERFDLIAGYTY---------NKVKFKDAID------ 592

Query: 716 IAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTLKVPGYTLF 775
              +G T Y  P   AS W  Y        G  +GAGARY+G  W D  NTL++P  TL 
Sbjct: 593 -GNDGNTPYLAPDQMASLWGKYAT----AYGVDLGAGARYIGKQWADNENTLRIPSVTLL 647

Query: 776 DAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASATYQW 833
           DA+V  ++  +        + LN  NL +++YVA+CY   +C++G++R+V A+  Y +
Sbjct: 648 DASVRMNLDRVNPSLKGAYVQLNVNNLTDRKYVAACYGTGYCYWGAERSVVATVGYDF 705