Pairwise Alignments

Query, 833 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 703 a.a., Ferric hydroxamate outer membrane receptor FhuA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  489 bits (1260), Expect = e-142
 Identities = 271/723 (37%), Positives = 416/723 (57%), Gaps = 45/723 (6%)

Query: 123 QATTISGAYQA-ESPTGPVSGYVATRSLSGTKTDTALIETPQSISIVTKDQMRAQNAESL 181
           +  T++ A  A ES  GP     A RS + TKTDT + +TPQS+S+VT ++M+    +S+
Sbjct: 14  ETITVTAAPAAQESAWGPAPTIAAKRSATTTKTDTPIEKTPQSVSVVTNEEMQMHQFQSV 73

Query: 182 NQILRYSAAVIPETRGATASRLDQLTIRGFSPA-----TYLDGLRMPSSRDALPQKDAFD 236
            + L Y+  V   +RGA+ +  D + IRGFS        YLDGL++  +       D + 
Sbjct: 74  KEALGYTPGVTVSSRGAS-NTYDFVIIRGFSSVGLSQNNYLDGLKLQGNFYNDAVIDPYM 132

Query: 237 LERVEVLRGPASVLYGQGTPSGVINMVSKRPLDTPFHEVGVEYGTFNKKRTTFDLSGPMD 296
           LERVE++RGP SVLYG+  P G+I+MVSKRP   P  E+  + GT N  +T FD S  +D
Sbjct: 133 LERVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDSLD 192

Query: 297 DQGVYSYRVAGLFDDADGQVEHTETRRQSLSSAFTWRPDDATSLTLLGHFQKDPKGASYG 356
           D G +SYR+ GL    + Q + +E++R +++ +FTWRPD+ T+ T L +FQ +P+   YG
Sbjct: 193 DNGEFSYRLTGLARSTNEQQKSSESQRYAIAPSFTWRPDEKTNFTFLSYFQNEPETGYYG 252

Query: 357 SVPAWGSVLHSPTGRSIDVDFYDGEKNFEKSDREYYSIGWAFEHHFDDVWTVRQNARYLR 416
            +P  G+V   P G+ +  DF +G  N   S R    +G++FEH F+D +TVRQN R++ 
Sbjct: 253 WLPKEGTVEPLPNGKRLPTDFNEGASNNTYS-RNEKMVGYSFEHGFNDTFTVRQNLRFVE 311

Query: 417 SEGQYRSLYSNYLMADYRTIRRSTIASDVDLDAYTLDNQVQAKFDTGPLQHTLLMGLDYQ 476
            +   +S+Y   + AD  T+ R TI  +  L  +++D Q+++KF TG + HTLL G+D+ 
Sbjct: 312 MKTAQKSVYGTGIAADGHTLNRGTIVDNERLQNFSVDTQLESKFATGDIDHTLLTGVDFM 371

Query: 477 NTSTDTLSGSGVYTAGPTLDIFN---PVYGAAVPVPAYTTDGTSRSEQTGVYLQEQMKWD 533
               D    +  + + P++D++N   P Y A      Y     + S+QTG+Y+Q+Q +W+
Sbjct: 372 RMRNDI---NATFGSAPSIDLYNNYHPEYFAFGGAEPYQ---MNESKQTGLYVQDQAEWN 425

Query: 534 KWVLLLGGRYDWASTDNST-QTLSSGAKSKSSLDSKAFTGRIGLVYLFDNGLAPYASYAE 592
           KWV  LGGRYDW+    +  Q  ++  +     +   FT R G+ Y+FDNG++PY SY++
Sbjct: 426 KWVFTLGGRYDWSKQATTVRQNSTTPTEGYIERNDHQFTWRGGVNYVFDNGISPYFSYSQ 485

Query: 593 SFNPQSGTGYGGS--VFKPTEGKQYEIGIKYQPPGSNSFITAAIFDLRQTNVLTTDPDPT 650
           SF P +   +      +KP++G+QYE G+KY P      +T A++ L +TN LT DP   
Sbjct: 486 SFEPSAFDLWSTPRVSYKPSKGEQYEAGVKYVPKDMPVVVTGAVYQLTKTNNLTADPT-- 543

Query: 651 HLCGTGRCQSQDGEVQSRGFELEGKASLNDNLDITAAYAYLDNRISKSNNTVRYAPISDI 710
                   Q   GE+++RG ELE KA+L  N+++TA+Y Y D   +K  N          
Sbjct: 544 ----NPLAQVPAGEIRARGVELEAKAALTANINMTASYTYTDAEYTKDTN---------- 589

Query: 711 GVGPAIAAEGTTTYGVPRHTASAWADYTVHDGKLKGFGVGAGARYVGSSWGDTANTLKVP 770
                   +G T   VP H AS W DYT ++G L G  +G G R++GSS+GD AN+ KV 
Sbjct: 590 -------LKGNTPEQVPEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGDPANSFKVG 642

Query: 771 GYTLFDAAVHYDIPNIARLKDNLRLALNATNLANKEYVASCYSYSWCWYGSQRTVQASAT 830
              + DA V YD+        +  +A+N  NL ++EYVASC+    C++G++R V A+AT
Sbjct: 643 SAAVMDAVVKYDLARFGMAGSS--IAVNVNNLLDREYVASCFQTYGCFWGAERQVVATAT 700

Query: 831 YQW 833
           +++
Sbjct: 701 FRF 703