Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 283 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 69/327 (21%), Positives = 125/327 (38%), Gaps = 48/327 (14%)

Query: 1   MKGLKTLLAASLTTLGLSVAALPVSAAEAPVHFADLNWESGSLITEVLRVIVEK--GYDL 58
           MK  + L AA+   + +S       +    + + D  W      T V   +++   GYD+
Sbjct: 1   MKMRRLLGAAATLVVAMSSTLASADSKTLSIGYVD-GWSDSVATTHVAAEVIKSKLGYDV 59

Query: 59  PTDTLPGTTITLETALAKNDIQVIGEEWAGRSPVWVKAEAEGKVVGLGDTVKGATEGWWV 118
               +    +    A  K D  +           W K +   KVV  G   K A  G  V
Sbjct: 60  KLQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWAKNK--DKVVDYGPNFKDAKIGLIV 117

Query: 119 PEYVVKGDPAKGIKPLAPELKSVKDLARYKDVFKDPESPGKGRFLNSPIGWTSEVVNKQK 178
           PEYV              + KS++DL          ++  K + +    G    +   + 
Sbjct: 118 PEYV--------------KAKSIEDLKT--------DTTFKNKIVGIDAGSGVMLKTDEA 155

Query: 179 LKAYGLDDSYVNFRSGSGAALDAEIASSIRRGKPVLFYYWSPTPLMGRYKLIQLEEPPFD 238
           +K YGLD      ++ SGAA+ AE+  +  + + +    W P  +  ++KL  L++P   
Sbjct: 156 IKQYGLD---YKLQASSGAAMIAELTRAEDKQESIAVTGWVPHWMFAKWKLRFLDDPKGI 212

Query: 239 AEAWKTLTDADNPNPKPTRSLASKLSIGVSTPFQKEHPQIAQFFEKVEFPIEPLNKALAT 298
             A +T+                  SIG S   +K+ P++A F +K ++  +     +  
Sbjct: 213 YGAAETVN-----------------SIG-SKGLEKKAPEVAAFLKKFQWASKDEIGEVML 254

Query: 299 MSENHTAPREVAQMFLKEHPQVWKAWL 325
             +    P   A+ ++ +HP+    W+
Sbjct: 255 AIQEGAKPDAAAKDWVAKHPERVAEWV 281