Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 339 a.a., Glycine betaine/L-proline transport substrate-binding protein ProX (TC 3.A.1.12.1) from Variovorax sp. SCN45

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 82/331 (24%), Positives = 139/331 (41%), Gaps = 30/331 (9%)

Query: 6   TLLAASLTTLGLSVAALPVSAAEAPVHFADLNWESGSLITEVLRVIVEKGYDL-PTDTLP 64
           T LA      G  V  LP+ ++ A   F  L          V+R + + GY + P   L 
Sbjct: 23  TALATGNDLPGKGVTVLPLKSSLAEEAFQTLL---------VMRALEKLGYTVEPMKDLE 73

Query: 65  GTTITLETALAKNDIQVIGEEWAG-RSPVWVKAEAEGKVVGLGDTVKGATEGWWVPEYVV 123
             T  L  A+A  D   +   W+   +  +  +  + K+   G    GA +G+ +     
Sbjct: 74  PATEHL--AIANGDATFMTNHWSLLHADFYKNSGGDAKLWRKGVYSDGAVQGYLIDR--- 128

Query: 124 KGDPAKGIKPLAPELKSVKDLARYKDVFKDPESPGKGRFLNSPIGWTSEVVNKQKLKAYG 183
           K     GI  +A     +KD A  K    D +  GK        GW  E+  +  L AY 
Sbjct: 129 KTAEQYGITSIA----QLKDPAIAK--LFDADGDGKADLTGCNPGWGCELAIENHLTAYQ 182

Query: 184 LDDSYVNFRSGSGAALDAEIASSIRRGKPVLFYYWSP----TPLMGRYKLIQLEEPPFDA 239
           L D+ V  + GS AAL A+  +  ++ KPVL+Y W+P      L     ++ L+ P   +
Sbjct: 183 LRDT-VTHKQGSYAALMADTIARFKQEKPVLYYTWTPYWVSAVLRPGADVVWLQVPFSSS 241

Query: 240 EAWKTLTDADNPNPKPTRSLASKLSIGVSTPFQKEHPQIAQFFEKVEFPIEPLNKALATM 299
           +      D   PN K     A++  I  +  F +++P   + FE ++ PI  +N     M
Sbjct: 242 QGDAGNVDTQLPNGKNYGFQANQEQIVANRAFVEKNPAAGKLFEVMKLPISDINAQNLRM 301

Query: 300 SENHTAPREVAQM---FLKEHPQVWKAWLTE 327
           S+     ++V +    ++K H +++  W+ +
Sbjct: 302 SQGANTQQDVERHTDGWIKAHQELFDGWIAQ 332