Pairwise Alignments

Query, 338 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 81/347 (23%), Positives = 137/347 (39%), Gaps = 40/347 (11%)

Query: 8   LAASLTTLGLSVAALPVSA--AEAPVHFADLNWESGSLITEVLRVIVEKGYDLPTDTLPG 65
           L+  L    L  A +P +A  A+  +   + NW     I  +L  I+    D     L G
Sbjct: 5   LSRGLAGFALLAALVPATASFAKDKIVIGEQNWTGAIAIQYILGDIISNRLDGEVSYLAG 64

Query: 66  TTITLETALAKND--IQVIGEEWAGRSPVWVKAEAEGKVVGLGDTVKG--ATEGWWVPEY 121
               L  A AK D  + V+ + W             G    L    +     +G+++P Y
Sbjct: 65  DLPILFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVGVQGFYIPGY 124

Query: 122 VVKGDPAKGIKPLAPELKSVKDLARYKDVFK--DPESPGKGRFLNSPIGWTSEVVNKQKL 179
           +               +KSV DL +  +V K   P   GK + L  P GW S  + + K 
Sbjct: 125 IQD----------KYNVKSVYDLKK-PEVAKLFAPLGGGKSQLLVGPAGWESTYIGQIKA 173

Query: 180 KAYGLDDSYVNFRSGSGAALDAEIASSIRRGKPVLFYYWSPTPLMGRYKLIQLEEPPFDA 239
           K +G D ++ +  S   +   A++ ++ +  + V+FY ++P  +   Y L +L+EPPFD 
Sbjct: 174 KDFGFDGNFESV-STEASVTYAKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLDEPPFDG 232

Query: 240 EA---------------WKTLT---DAD--NPNPKPTRSLASKLSIGVSTPFQKEHPQIA 279
            A               WK ++   DAD  N +        +K+ I  S+  ++  P+IA
Sbjct: 233 YAQDNKKGDPLYKADGCWKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQRAPRIA 292

Query: 280 QFFEKVEFPIEPLNKALATMSENHTAPREVAQMFLKEHPQVWKAWLT 326
            F E V      LN  +  +          A+ ++  +      WL+
Sbjct: 293 AFLENVSIDPASLNDLILKIEREKQPADAAAKAWVAANQATVDRWLS 339