Pairwise Alignments
Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417
Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417
Score = 131 bits (329), Expect = 9e-35
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 4/285 (1%)
Query: 69 VGDGMGELTRDLSYTTSHNALSAAAVAYSVKQLAARLQSQLGAAKQIVSSAEVMIGTEKL 128
+G + EL + + A +A ++ +Q +A + SQ Q+ ++ M T +
Sbjct: 353 MGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATVQE 412
Query: 129 TSQLSRDALGAASQAHQRSTEGREVLTQSITRMHQLSQRANASRELIEALSLRSEEIQRV 188
++ + A AA+ A ++ G +V+ ++I ++ +L+ S + + L S +I V
Sbjct: 413 VARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNKIGSV 472
Query: 189 TLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTATATDEVGVMVADI 248
VI+++A QTNLLALNAAIEAARAGE GRGFAVVADEVRGLA RT +T+E+ +VA +
Sbjct: 473 MDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGL 532
Query: 249 QQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADVEGQVNEIAQGTDTNRTQL 308
Q T QV + + + VE AG L+NI R ++++ +IA +
Sbjct: 533 QNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVA 592
Query: 309 DSLFHAVEQMRSDLAVSDQQTRQLADAAVQMEGQAETISERLAEV 353
+ + ++ +R +QT +D + + + +L ++
Sbjct: 593 EEISRSIVNVRD----VSEQTATASDETAKSSVELARLGSQLQQM 633
Score = 41.6 bits (96), Expect = 9e-08
Identities = 67/317 (21%), Positives = 129/317 (40%), Gaps = 47/317 (14%)
Query: 82 YTTSHNALSAAAVAYSVKQLAARLQ---SQLGAAKQIVSSA-EVMIGTEKLTSQLSRDAL 137
YT + + + A A +++ A L+ + GA++Q +A E +G + Q + A
Sbjct: 188 YTGNVSPETEARAAAQIEKAIAGLKDLNATFGASQQSALTALETALGAYRSAVQNYKAAN 247
Query: 138 GAASQAH-QRSTEGREVLTQS-------ITRMHQLSQRANASRELIEALSLRSEEIQRVT 189
A + +T+G +++T S +TR S +A + + + L+L I +
Sbjct: 248 ANIVTARAEMTTQGADIVTISDKLYEIQLTRRDAESAQARSLQLISTLLALLVGVIAALV 307
Query: 190 LVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTATATDEVGVMVADIQ 249
+ Q LA+ +E +G+ V T DE+GV+ IQ
Sbjct: 308 ITRQITRPIQETLAV---VERIASGDLSHNIQV-------------TRRDELGVLQQGIQ 351
Query: 250 QRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADVEGQVNEIAQGTDTNRTQLD 309
+ +R+L + ++ GV Q+ A E+L + + + G ++ + + D
Sbjct: 352 RMGTT----LRELISGIRDGVTQIASAAEELSAV----------TEQTSAGVNSQKIETD 397
Query: 310 SLFHAVEQMRSDLAVSDQQTRQLADAAVQMEGQAETISERLAEVGLDDYHQRIYDLAREG 369
+ A+ +M + + + Q + AA +GQA + +AE +I LA E
Sbjct: 398 QVATAMHEMTATVQEVARNAEQASLAAADADGQARAGDKVVAEA-----IAQIERLAAEV 452
Query: 370 ASQIAAQFEADVQQNRI 386
A A + N+I
Sbjct: 453 ARSTDAMTHLQQESNKI 469
Score = 36.6 bits (83), Expect = 3e-06
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 135 DALGAASQAHQRSTEGREVLTQSITR-MHQLSQRANASREL----IEALSLRSEEIQRVT 189
D + +Q Q+STE E L + Q++ N SR L +E ++ +T
Sbjct: 509 DEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENIT 568
Query: 190 LVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTATATDEV---GVMVA 246
+ +I S +A A ++A A E R VR ++ +TATA+DE V +A
Sbjct: 569 RTVSNIQSMNQQIAAAAEQQSAVAEEISRSIV----NVRDVSEQTATASDETAKSSVELA 624
Query: 247 DIQQRTVQVVEQIR 260
+ + Q+V R
Sbjct: 625 RLGSQLQQMVSHFR 638
Score = 29.3 bits (64), Expect = 5e-04
Identities = 37/194 (19%), Positives = 80/194 (41%), Gaps = 20/194 (10%)
Query: 149 EGREVLT---QSITRMHQLSQRANASRELI-EALSLRSEEIQRVTLVIQSIASQTNLLAL 204
E + ++T QS+ +M + + NASR+++ + + + +I + ++ + + LA
Sbjct: 108 EQKSIITAYQQSLNKMREAYRNGNASRQVMGDKADIANAQINALETSVKQMPDSSEHLAQ 167
Query: 205 NAAIEAARAGEHGRGFAVVADEVRGLAGRTATATD-----EVGVMVADIQQRTVQVVEQI 259
A+ A+ F + EVRG G + T+ ++ +A ++
Sbjct: 168 FQAVADAK-----MQFQLARYEVRGYTGNVSPETEARAAAQIEKAIAGLKDLNATFGASQ 222
Query: 260 RQLSTDLQTGVEQVEHAGEQLQNIARLSAD-VEGQVNEIAQGTDTNRTQLDSLFHAVEQM 318
+ T L+T + A +QN +A+ V + QG D + + ++
Sbjct: 223 QSALTALETALGAYRSA---VQNYKAANANIVTARAEMTTQGADI--VTISDKLYEIQLT 277
Query: 319 RSDLAVSDQQTRQL 332
R D + ++ QL
Sbjct: 278 RRDAESAQARSLQL 291