Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  136 bits (342), Expect = 3e-36
 Identities = 100/328 (30%), Positives = 170/328 (51%), Gaps = 34/328 (10%)

Query: 20  PLLQSAALVLVLLGLALASLPLYLCLPLALLVIWLPRLKSRAPASAPSEVGDGMGELTRD 79
           PL +     L+ + +A+ ++ + L L + +L+  L  +       A  ++  G G+LTR 
Sbjct: 267 PLGKFRTSALIAMLIAVVAIAVLLSLLIQVLLRPLTTM-----GVAMQDIAQGEGDLTRR 321

Query: 80  LSYTTS-----------------HNALSAAAVA------YSVKQLAARLQSQLGAAKQIV 116
           L  T+                  H ++S  + A       S + +A+   S +G+ +Q  
Sbjct: 322 LVVTSKDEFGEVGSAFNQFVERIHASISEVSSATRQVHDLSQRVMASSNASIIGSDEQSA 381

Query: 117 SSAEVMIGTEKL---TSQLSRDALGA---ASQAHQRSTEGREVLTQSITRMHQLSQRANA 170
            +  V     +L   T +++R+A  A   AS A +++ +GR+V+ Q+I  M +LSQ+ + 
Sbjct: 382 RTNSVAAAINELGAATQEIARNAADASQHASGASEQADDGRKVVEQTILAMSELSQKISL 441

Query: 171 SRELIEALSLRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGL 230
           S   IE L+  ++ I  +  VI+ I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR L
Sbjct: 442 SCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNL 501

Query: 231 AGRTATATDEVGVMVADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADV 290
           A RT  + +E+  M+  +Q  + + V  +    T  +  VE    AGE+L ++ +   ++
Sbjct: 502 AHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSSEESVEVANQAGERLVSVTQRIVEI 561

Query: 291 EGQVNEIAQGTDTNRTQLDSLFHAVEQM 318
           +G    +A  T+     +++L   + Q+
Sbjct: 562 DGMNQSVAAATEEQTAVVETLNVDINQI 589



 Score = 31.6 bits (70), Expect = 9e-05
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 10/111 (9%)

Query: 92  AAVAYSVKQLAARLQSQLGAAKQIVSSAEVMIGTEKLTSQLSRDALGAASQAHQRSTEGR 151
           A VA  V+ LA R Q       ++++S +V           SR+A+   + +   S E  
Sbjct: 492 AVVADEVRNLAHRTQESAEEIHKMITSLQVG----------SREAVTTMNASQTSSEESV 541

Query: 152 EVLTQSITRMHQLSQRANASRELIEALSLRSEEIQRVTLVIQSIASQTNLL 202
           EV  Q+  R+  ++QR      + ++++  +EE   V   +    +Q NLL
Sbjct: 542 EVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLL 592



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 10/124 (8%)

Query: 214 GEHGRGFAVVADEVRGLAGRTATATDEVGVMVADIQQRTVQVVEQIRQLSTDLQTG---- 269
           GE G  F    + +       ++AT +V     D+ QR V        + +D Q+     
Sbjct: 331 GEVGSAFNQFVERIHASISEVSSATRQVH----DLSQR-VMASSNASIIGSDEQSARTNS 385

Query: 270 -VEQVEHAGEQLQNIARLSADVEGQVNEIAQGTDTNRTQLDSLFHAVEQMRSDLAVSDQQ 328
               +   G   Q IAR +AD     +  ++  D  R  ++    A+ ++   +++S  Q
Sbjct: 386 VAAAINELGAATQEIARNAADASQHASGASEQADDGRKVVEQTILAMSELSQKISLSCTQ 445

Query: 329 TRQL 332
              L
Sbjct: 446 IETL 449