Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  137 bits (344), Expect = 2e-36
 Identities = 90/282 (31%), Positives = 151/282 (53%), Gaps = 15/282 (5%)

Query: 69  VGDGMGELTRDLSYTTSHNALSAAAVAYSVKQLAARLQSQLGAAKQIVSSAEVMIGTEKL 128
           +  G+G+L++           +A  +A S +    R+  Q     Q+ ++   M  T + 
Sbjct: 372 IDQGVGQLSQ-----------AATQLAASSEDTKLRINQQREETDQVATAMNQMSATVQE 420

Query: 129 TSQLSRDALGAASQAHQRSTEGREVLTQSITRMHQLSQRANASRELIEALSLRSEEIQRV 188
            +Q +  A  AA+ A Q++  G +V++++I R+ QL+ + +     ++ L+  S+ I  +
Sbjct: 421 VAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGSI 480

Query: 189 TLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGRTATATDEVGVMVADI 248
             VI+S++ QTNLLALNAAIEAARAGE GRGFAVVADEVRGLA RT+TAT+E+G ++  +
Sbjct: 481 LDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQLIDSL 540

Query: 249 QQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADVEGQVNEIAQGTDTNRTQL 308
              T +V   +    +  +  VE    AG  L  I    + ++G   +IA  ++      
Sbjct: 541 HNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEEQSVVA 600

Query: 309 DSLFHAVEQMRSDLAVSDQQTRQLADAAVQMEGQAETISERL 350
           + +  +V  +R    VSD QT   ++      G+ E + ++L
Sbjct: 601 EQINRSVINVRD---VSD-QTSAASEQTAASSGELEQLGQQL 638



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 63/308 (20%), Positives = 126/308 (40%), Gaps = 29/308 (9%)

Query: 107 SQLGAAKQIVSSAEVMIGTEKLTSQLSRDALGAASQAHQRSTEGREVLTQSITRMHQLSQ 166
           SQ+   ++     ++     ++T  L RD +G   Q       G   L+Q+ T++   S+
Sbjct: 340 SQVDTVQRRDEMGQLQTSMREMTLSL-RDLIGGIDQ-------GVGQLSQAATQLAASSE 391

Query: 167 ----RANASRELIEALSLRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAV 222
               R N  RE  + ++    ++      +   A Q +L A NA  + A+ G+     A+
Sbjct: 392 DTKLRINQQREETDQVATAMNQMSATVQEVAQNAEQASLAATNAD-QQAQVGDQVVSEAI 450

Query: 223 VADEVRGLAGRTATATDEVGVMVADIQQRTVQVVEQIRQLSTD-----LQTGVEQVEHAG 277
               +  LAG+       +  +  +  QR   +++ I+ +S       L   +E    AG
Sbjct: 451 --GRIEQLAGQMDHCLAAMQHLAGE-SQRIGSILDVIKSVSEQTNLLALNAAIEAAR-AG 506

Query: 278 EQLQNIARLSADVEGQVNEIAQGTDTNRTQLDSLFHAVEQMRSDLAVSDQQTRQLADAAV 337
           E  +  A ++ +V G     +  T+     +DSL +  +++   L  S   T Q  + + 
Sbjct: 507 EAGRGFAVVADEVRGLAQRTSTATEEIGQLIDSLHNGTDEVTRLLDSSKSLTEQSVELSR 566

Query: 338 QMEGQAETISERLAEVGLDDYHQRIYDLAREGASQIAAQFEADVQQNRISLDDLFDRSYT 397
           +       I++ ++ +     +Q+I   A E  S +A Q    V    I++ D+ D++  
Sbjct: 567 RAGHALSQITDTVSSI--QGMNQQI-ATASEEQSVVAEQINRSV----INVRDVSDQTSA 619

Query: 398 LIANTSPS 405
               T+ S
Sbjct: 620 ASEQTAAS 627