Pairwise Alignments

Query, 531 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 4e-36
 Identities = 99/327 (30%), Positives = 171/327 (52%), Gaps = 36/327 (11%)

Query: 23  QSAALVLVLLGLALASLPLYLCLPLALLVIWLPRLKSRAPASAPSEVGDGMGELTRDLSY 82
           +++A++ +L+ +A  +  L L +P+ +  +            A  ++ +G G+LTR L+ 
Sbjct: 289 RTSAIIAMLIAVAAIAGLLGLLIPVLMSPL-------TTMGRAMRDIAEGEGDLTRRLAV 341

Query: 83  TTS-----------------HNALSAAAVA------YSVKQLAARLQSQLGAAKQIVSSA 119
                               H ++S  + A       S K ++A   S +G+ +Q + + 
Sbjct: 342 QNKDEFGELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTN 401

Query: 120 EVMIGTEKL---TSQLSRDALGA---ASQAHQRSTEGREVLTQSITRMHQLSQRANASRE 173
            V     +L   T +++R+A  A   AS A +++  GREV+ ++I+ M  LSQR + S  
Sbjct: 402 SVAAAINELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCA 461

Query: 174 LIEALSLRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRGLAGR 233
            IE L+  ++EI ++  VI+ I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA R
Sbjct: 462 QIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHR 521

Query: 234 TATATDEVGVMVADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGEQLQNIARLSADVEGQ 293
           T  + +E+  M+  +Q  + + V  +       +  V+    AGE+L ++ +   +++G 
Sbjct: 522 TQESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGM 581

Query: 294 VNEIAQGTDTNRTQLDSLFHAVEQMRS 320
              +A  T+     ++SL   + Q+ +
Sbjct: 582 NQSVATATEEQTAVVESLNLDITQINA 608



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 29/248 (11%)

Query: 57  LKSRAPASAPSEVGDGMGELTRDLSYTTSHNALSAAAVAYSVKQLAARLQSQLGAAKQIV 116
           +++ + A+A +E+G    E+ R+ +  + H A  A+  A+  +++     S + A  Q +
Sbjct: 398 MRTNSVAAAINELGAATQEIARNAADASQH-ASGASEQAHGGREVVEEAISAMTALSQRI 456

Query: 117 SSAEVMIGT---------------EKLTSQLSRDALGAASQAHQRSTEGR--EVLTQSIT 159
           S +   I T               + ++ Q +  AL AA +A +    GR   V+   + 
Sbjct: 457 SESCAQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVR 516

Query: 160 RM-HQLSQRANASRELIEALSLRSEEIQRVTLVIQSIASQTNLLALNAAIEAARAGEHGR 218
            + H+  + A     +I +L + S E    T+    ++S+  +   N      +AGE   
Sbjct: 517 NLAHRTQESAEEIHRMITSLQVGSREAVH-TMNTSQVSSEQTVQVAN------QAGERLA 569

Query: 219 GFAVVADEVRGLAGRTATATDEVGVMVADIQQRTVQVVEQIRQLSTDLQTGVEQVEHAGE 278
                  E+ G+    ATAT+E   +V  +     Q+    +Q   +L    E + H  +
Sbjct: 570 SVTQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQQGVENLN---ETLRHCDQ 626

Query: 279 QLQNIARL 286
             Q   RL
Sbjct: 627 LAQQAGRL 634