Pairwise Alignments

Query, 134 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

Subject, 138 a.a., RNA polymerase-binding protein DksA from Magnetospirillum magneticum AMB-1

 Score = 72.8 bits (177), Expect = 2e-18
 Identities = 38/129 (29%), Positives = 75/129 (58%), Gaps = 5/129 (3%)

Query: 9   MPADD--YMNAEQHAFFEKLLQDMKVEHHERIEQNRIAIES--LDTPADPADAASVEEER 64
           +P++D  +MN     +F + L   + E     ++    ++   +  P D AD AS E +R
Sbjct: 10  VPSEDEPFMNDTMKEYFRQKLLRWRAELLRESDETLQHLQEGGMQEP-DIADRASAEADR 68

Query: 65  TWLVNAIDRDQRMLPQLERALERIKEDSFGWCDDSGEPIGLKRLLISPTTKYCIEAQERH 124
              +   DR+++++ +++ A+ R+ + S+G+C+++GEPI ++RL   P     IEAQERH
Sbjct: 69  ALELRTRDRERKLISKIDAAIGRVADGSYGYCEETGEPISIRRLEARPIATLSIEAQERH 128

Query: 125 EQIDKHQRQ 133
           E++++  R+
Sbjct: 129 ERLERTHRE 137