Pairwise Alignments

Query, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

Subject, 321 a.a., ribose ABC transporter permease from Serratia liquefaciens MT49

 Score =  214 bits (546), Expect = 2e-60
 Identities = 132/329 (40%), Positives = 194/329 (58%), Gaps = 28/329 (8%)

Query: 16  SRRRLPTELSIFLVLIGIGLVFELFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIGVTQ 75
           S+  L  + S+  +L+ I +V  +         F +N+  L  ++ Q S+  ++A+G+T 
Sbjct: 12  SKEWLLEQKSLIALLVLIAVVSSM-----SPNFFTLNN--LFNILQQTSVNAIMAVGMTL 64

Query: 76  VIITTGIDLSSGSVLALSAMIAASLAQTSDFSRAVFPSLTDLPVWIPVAMGLGVGLLAGA 135
           VI+T+GIDLS GS+LAL+  +AAS+               ++   + VA  L +G   GA
Sbjct: 65  VILTSGIDLSVGSLLALTGAVAASIVGF------------EVNAVVAVAAALALGAAVGA 112

Query: 136 INGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSM----LSDSYTAIGHGA----- 186
             G I+A   +  FIATL MM+  RG+   YT G PV+     ++D++   G G      
Sbjct: 113 CTGVIVAKGKVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTDVADTFGWFGIGRPLGVP 172

Query: 187 MPVIIFLVVAVIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGL 246
            P+ I  +V +     L +T+ G+Y YA+GGN  A R SGI+V +  IIVYS+ GLLA L
Sbjct: 173 TPIWIMAIVFIAAWYMLHHTRLGRYIYALGGNEAATRLSGISVDKVKIIVYSLCGLLAAL 232

Query: 247 AGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFT 306
           AGV+  AR ++ Q   G  YELDAIAA V+GGTSLAGG GRI GT+IGALILG + +G  
Sbjct: 233 AGVIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLN 292

Query: 307 FVGVDAYIQDIIKGLIIVVAVVIDQYRNK 335
            +GV +Y Q I+K ++I++AV+++   NK
Sbjct: 293 LLGVSSYYQMIVKAVVILLAVLVENKSNK 321