Pairwise Alignments

Query, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

Subject, 329 a.a., ribose ABC transporter permease from Serratia liquefaciens MT49

 Score =  218 bits (555), Expect = 2e-61
 Identities = 128/329 (38%), Positives = 199/329 (60%), Gaps = 22/329 (6%)

Query: 13  PTKSRRRLPTELSIFLVLIGIGLVFELFGWIVRDQSFLMNSQRLVLMILQVSIIGLLAIG 72
           PT  R  L   +    +L  + L+  +FG++  +         L+ +  Q SI  +LA G
Sbjct: 13  PTLKRALLGDMMQTVGILPILILIVAVFGFVAPN---FFTDANLLNIARQASINIVLAAG 69

Query: 73  VTQVIITTGIDLSSGSVLALSAMIAASLAQTSDFSRAVFPSLTDLPVWIPVAMGLGVGLL 132
           +T +I+T GIDLS GS+L  +A++A +++        + P +  + + + +  GLG+GL 
Sbjct: 70  MTFIILTGGIDLSVGSMLGTTAVVAMAVS--------LMPGMAGMSIPLALLAGLGMGLF 121

Query: 133 AGAINGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSMLSDSYTAIGH---GAMP- 188
               NG ++A  G+PPFI TLG   + RG A    +G  +   + S+  IG+   G +P 
Sbjct: 122 ----NGFLVAYAGLPPFIVTLGTYTALRGAAYLLADGTTIINSNISFEWIGNAYLGPIPW 177

Query: 189 --VIIFLVVAVIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLIIVYSIAGLLAGL 246
             +I F V+AV + I LR T  G + YA+GGNMQAAR +GI V   L+ VY ++GLL+GL
Sbjct: 178 LVIIAFAVIAVCWFI-LRRTTLGVHIYAVGGNMQAARLTGIKVGAVLLFVYGMSGLLSGL 236

Query: 247 AGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGALILGVMASGFT 306
            GV++++R  +    +GM YELDAIAA ++GGTS  GG+G ITGT++GALI+  + +G T
Sbjct: 237 GGVMSASRLYSANGNLGMGYELDAIAAVILGGTSFVGGIGTITGTLVGALIIATLNNGMT 296

Query: 307 FVGVDAYIQDIIKGLIIVVAVVIDQYRNK 335
            +GV  + Q +IKG +I++AV+ID+YR +
Sbjct: 297 LMGVSYFWQLVIKGAVIIIAVLIDKYRTR 325