Pairwise Alignments

Query, 340 a.a., Inositol transport system permease protein (from data) from Pseudomonas simiae WCS417

Subject, 321 a.a., ribose ABC transporter permease from Escherichia coli ECRC62

 Score =  213 bits (542), Expect = 5e-60
 Identities = 137/335 (40%), Positives = 194/335 (57%), Gaps = 34/335 (10%)

Query: 11  TVPTKSRRR------LPTELSIFLVLIGIGLVFELFGWIVRDQSFLMNSQRLVLMILQVS 64
           T  T S RR      L  + S+  +L+ I +V  L         F +N+  L  ++ Q S
Sbjct: 2   TTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTL-----SPNFFTINN--LFNILQQTS 54

Query: 65  IIGLLAIGVTQVIITTGIDLSSGSVLALSAMIAASLAQTSDFSRAVFPSLTDLPVWIPVA 124
           +  ++A+G+T VI+T+GIDLS GS+LAL+  +AAS+               ++   + VA
Sbjct: 55  VNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGI------------EVNALVAVA 102

Query: 125 MGLGVGLLAGAINGSIIAVTGIPPFIATLGMMVSARGLARYYTEGQPVSM----LSDSYT 180
             L +G   GA+ G I+A   +  FIATL MM+  RG+   YT G PV+      +D + 
Sbjct: 103 AALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFG 162

Query: 181 AIGHGA-----MPVIIFLVVAVIFHIALRYTKYGKYTYAIGGNMQAARTSGINVKRHLII 235
             G G       PV I  +V +     L +T+ G+Y YA+GGN  A R SGINV +  II
Sbjct: 163 WFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKII 222

Query: 236 VYSIAGLLAGLAGVVASARAATGQAGMGMSYELDAIAAAVIGGTSLAGGVGRITGTVIGA 295
           VYS+ GLLA LAG++  AR ++ Q   G  YELDAIAA V+GGTSLAGG GRI GT+IGA
Sbjct: 223 VYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGA 282

Query: 296 LILGVMASGFTFVGVDAYIQDIIKGLIIVVAVVID 330
           LILG + +G   +GV +Y Q I+K ++I++AV++D
Sbjct: 283 LILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVD 317