Pairwise Alignments

Query, 309 a.a., Inositol transport system sugar-binding protein (from data) from Pseudomonas simiae WCS417

Subject, 335 a.a., xylitol ABC transporter, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score =  162 bits (409), Expect = 1e-44
 Identities = 104/303 (34%), Positives = 166/303 (54%), Gaps = 18/303 (5%)

Query: 1   MKTPIRFTALALSMLLASGVASAAD---LKIGVSMSAFDDTFLTYLREDMDKQAKSYP-- 55
           MK      A A   LLA  +A AAD    K+G ++      F+    ++  ++ K +P  
Sbjct: 1   MKLGTTLAATAALSLLACSIAMAADGKTYKVGAAVYGLKGQFM----QNWVRELKEHPAV 56

Query: 56  KGDGVQLQFEDARADVVKQLSQVENFISQKVDAIIVNPVDTASTANIIKAATAAKIPLVF 115
           K   VQL   D   D + Q +Q+EN ++Q+ DAI+  P+DT +    +KAA +  + ++ 
Sbjct: 57  KDGTVQLTVFDGNYDALTQNNQIENMVTQRYDAILFVPIDTKAGVGTVKAAMSNDVVVIA 116

Query: 116 VNRRPDSQTLAPGVAAVTSDDVEAGKLQMQYIAEKLGGKGNIVILLGDLANNSTTNRTKG 175
            N    ++     V  V +DDVE G+LQ Q + +KL GKGN+VI+ G +  ++  +R KG
Sbjct: 117 SN----TKVADASVPYVGNDDVEGGRLQAQAMVDKLNGKGNVVIIQGPIGQSAQIDREKG 172

Query: 176 VKEVLTKYPGIKIEQEQTGIWLRDRGMTLVNDWL-TQGRDFQAVLSNNDEMAIGAAMALK 234
             EVL K+P IKI +++T  W R + + L  DWL    +    V++ ND+MA+GA  ALK
Sbjct: 173 ELEVLGKHPDIKIIEKKTANWDRAQALALTEDWLNAHPKGINGVIAQNDDMALGAVQALK 232

Query: 235 SAG--KKGVLIAGVDGTPDGLNAITKGDMTVSAFQDAKGQADKSVETA-RKMAKNEPIEQ 291
           S G   K V +  +DG PD + A  K ++T +  QDA+ Q+  +++ A R +A  +   Q
Sbjct: 233 SHGLTSKDVPVTSIDGMPDAIQAAKKDEVT-TFLQDAQAQSQGALDVALRALAGKDYKPQ 291

Query: 292 NVV 294
           +V+
Sbjct: 292 SVI 294