Pairwise Alignments

Query, 309 a.a., Inositol transport system sugar-binding protein (from data) from Pseudomonas simiae WCS417

Subject, 308 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  323 bits (827), Expect = 4e-93
 Identities = 163/306 (53%), Positives = 224/306 (73%), Gaps = 6/306 (1%)

Query: 6   RFTALALSMLLASGVASAADLKIGVSMSAFDDTFLTYLREDMDKQAKSYPKGDGVQLQFE 65
           R++ +  +++L     + A  +IGVS++  DD F+TY+R  ++  AK       VQ+QFE
Sbjct: 3   RYSLIVATLVLLFSQWTFAAYRIGVSIARVDDNFMTYVRTGLEAAAKQ----QDVQIQFE 58

Query: 66  DARADVVKQLSQVENFISQKVDAIIVNPVDTASTANIIKAATAAKIPLVFVNRRPDSQTL 125
           DA+ DVV+QL+QVE F++QKVDA+IV PVDTA+TAN+ +AA AAK PLV+VNR PD +TL
Sbjct: 59  DAQGDVVRQLNQVEGFLNQKVDAVIVLPVDTAATANMTRAAVAAKTPLVYVNRHPDERTL 118

Query: 126 APGVAAVTSDDVEAGKLQMQYIAEKLGGKGNIVILLGDLANNSTTNRTKGVKEVLTKYPG 185
             GV  V S+D+EAG+LQM+Y+AEKLGGKGN+ I++GDLA N+T +RT+G K+VL  +PG
Sbjct: 119 PKGVVTVASNDIEAGQLQMRYLAEKLGGKGNVAIIMGDLAQNATHDRTEGAKQVLKDFPG 178

Query: 186 IKIEQEQTGIWLRDRGMTLVNDWLTQGRDFQAVLSNNDEMAIGAAMALKSAGK-KG-VLI 243
           IK+ ++Q+  W R +GM L ++WL  G  F A+++NNDEMAIGAAMAL+ AGK KG + I
Sbjct: 179 IKVVEQQSAEWQRSKGMDLTSNWLLAGTQFDAIVANNDEMAIGAAMALQQAGKTKGEIAI 238

Query: 244 AGVDGTPDGLNAITKGDMTVSAFQDAKGQADKSVETARKMAKNEPIEQNVVIPFQLITPD 303
            G+DG PDGL AI +G +T S FQD K QA ++V  A +M K EPIE  V +PF+LI P+
Sbjct: 239 VGIDGLPDGLAAIKRGMLTASVFQDPKAQATQAVHAAVRMIKGEPIEPEVWVPFELIKPE 298

Query: 304 NVKDFK 309
            V  F+
Sbjct: 299 QVAVFE 304