Pairwise Alignments

Query, 362 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  400 bits (1027), Expect = e-116
 Identities = 188/353 (53%), Positives = 252/353 (71%), Gaps = 1/353 (0%)

Query: 8   FPLALVAAFSSASQAAPTVSVYNWTDYIGETTLADFQAKTGIKPIYDVFDSNETLEGKLL 67
           F LA +   +S + AA TV +YNW+ Y+   TL +FQ  +GI P YDV+DSNETL+GKL+
Sbjct: 4   FLLAPLMLAASVASAAETVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNETLDGKLM 63

Query: 68  AGRTGYDVVVPSNHFLARQVKAGAFLKLDRAQLPNFKNLDPKLLKLLEKNDPGNAHSVPY 127
            G +GYDVV PSNHF+ARQ++  A  +LD+++LPN+ NL+P LLK LE NDPGN +  PY
Sbjct: 64  TGNSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGNQYGFPY 123

Query: 128 LWGTNGIGYNVDKVKEVLGIDA-IDSWAVLFEPENIKKLNQCGVAFLDSADELFPAILNY 186
           LWG+ GIGYN+DKVK VLG +A +DSW ++F+PE + KL  CGVA LD+  EL P  L+Y
Sbjct: 124 LWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELLPIALHY 183

Query: 187 MGKDPRSENPEDYKQAEAKLLTLRPYITYFHSSKYISDLANGNICVAFGYSGDVFQAANR 246
           +G    S++P+DY++A+  L+ +RPYI+YFHSSKY  DLANG+ICV  G+SGDV QA NR
Sbjct: 184 LGLPHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDVLQAKNR 243

Query: 247 AKEAKNGVKIAYSIPKEGSNLWFDLLAIPADASHPKEAHAFINYLLDPQVIAKVSASVGY 306
           A EA NGVK+ YSIPKEG+ +WFD++A+P DA   K  +A++NYLL P+V+A +S  V Y
Sbjct: 244 ADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANISNHVQY 303

Query: 307 ANANPAAKAFMDPELVNNPEVYPSQDVLDKLYISTTPTPATMRLMTRAWSKVK 359
           AN N  A   +DP +  N  +YPS +V+ KLY          R+ TR W+ +K
Sbjct: 304 ANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIK 356