Pairwise Alignments

Query, 621 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  217 bits (553), Expect = 8e-61
 Identities = 131/301 (43%), Positives = 182/301 (60%), Gaps = 16/301 (5%)

Query: 326 LRLALRVKNRNLPVLVQGETGAGKEVFARQLHERSARHTGPFVAVNCAAIPENLIESELF 385
           L LA RV   +  VL+ GE+G GKEV AR +H++S R   PFVA+NCAAIP+N++E+ LF
Sbjct: 139 LELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRAAQPFVAINCAAIPDNMLEATLF 198

Query: 386 GYVAGAFTGASSKGMPGLLVQADGGTLFLDEIGDMPLALQTRLLRVMAEGEVAPLGAAKT 445
           G+  GAFTGA +    G   QA+GGTL LDEI +MP+ALQ +LLRV+ E EV  +G  K 
Sbjct: 199 GHEKGAFTGAIA-AQAGKFEQAEGGTLLLDEISEMPMALQAKLLRVLQEREVERVGGRKP 257

Query: 446 RAVDIHVICASHRDLSVLVSEGRFREDLFFRLGCARFCLPPLRERT-DKLALINRLLEQE 504
            ++DI V+  ++RDL+  V+ GRFREDL++RL        PLRER  D L L  RLL + 
Sbjct: 258 ISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLRERPGDILQLAERLLARH 317

Query: 505 -ARNSRVSVGIAPSALQLLLGYAWPGNVRQLRHVLAYACAVCEGGTVQVAD------LPV 557
            A+    SV ++P+A   L  YAWPGNVR+L + L  A  + +GG ++ AD      +P+
Sbjct: 318 VAKMKHASVRLSPAARACLQAYAWPGNVRELDNALQRALILQQGGVIEAADFCLAGAIPL 377

Query: 558 EVRGE---QVAAPT----EDRASPERQVVLDALIRHRWKPLPTAQALGISRATLYRRVNQ 610
               E   +V A      +D    E Q+++D L   R +    A+ LGIS  TL  ++ Q
Sbjct: 378 SAGTEPSLEVVADAGGLGDDMRRHEYQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQ 437

Query: 611 L 611
           +
Sbjct: 438 M 438