Pairwise Alignments

Query, 550 a.a., cyclic peptide transporter from Pseudomonas simiae WCS417

Subject, 552 a.a., pyoverdine ABC export system, fused ATPase and permease components from Pseudomonas putida KT2440

 Score =  776 bits (2003), Expect = 0.0
 Identities = 388/543 (71%), Positives = 462/543 (85%), Gaps = 1/543 (0%)

Query: 1   MTDPKRGAFNGLLALLRPFRTIVTVSVALGMAGGLAITLLLATINNALHSPQGMTQGVIL 60
           MT   RGA + L  LL+PF  +VTVS+ LGM GGL++T LLATIN+ALHS  G+TQGV+L
Sbjct: 1   MTSKPRGAVSELFGLLKPFWPLVTVSIILGMVGGLSVTALLATINSALHSDTGLTQGVVL 60

Query: 61  TFAALCVLALVSSIISDIGTNYVGQRIIAALRKDLGEKVLSAPIGQIERYRSHRLIPVLT 120
            FA LC+LAL SSI SD+GTN+VGQ IIA LR++LGEKVL+API QIERYRSHRLIPVLT
Sbjct: 61  GFAGLCLLALFSSICSDMGTNWVGQHIIARLRRELGEKVLAAPIDQIERYRSHRLIPVLT 120

Query: 121 HDVDTISDFSFAFTPLAIAATVTLGCLGYLAYLSVPMFLMMVVAIVIGSAVQFIAGGKGI 180
           HDVDTISDF+F F PLA++ TVT+GCLGYLA+LS+PMFL+++VAI IGS +QF+A   G+
Sbjct: 121 HDVDTISDFAFVFAPLAVSLTVTVGCLGYLAHLSIPMFLVILVAIGIGSVMQFVARSWGV 180

Query: 181 QGFDLARSHEDELQRYYNAIASGAKELRMHRPRRFRMNTHRIQETADRISDIQVRSVNIY 240
           +GF+ AR  EDELQ++Y+AIA GAKELR+HRPRR RM  H IQ+TA+RI   QVRS+N +
Sbjct: 181 RGFESAREAEDELQKHYSAIAEGAKELRIHRPRRKRMFQHGIQDTANRICATQVRSINTF 240

Query: 241 ILAKTFGSMLFFVVIGLALAMQAYNPNPDPTVITGFVLVLLYMKGPLEHLLGYLPVVGKA 300
           ++AKT GSMLFFVVI +ALAMQ+  P  D +V +GFVLVLLYMKGPLEHL+  LP++ KA
Sbjct: 241 VIAKTLGSMLFFVVIAVALAMQSLWPTGDKSVTSGFVLVLLYMKGPLEHLISTLPIISKA 300

Query: 301 KIAFGRISELSERFSSPEPHLLMDDSEAPTPIVNSLELRNVSYSPPAVEGSEPFHLGPIN 360
           +IAF RI+ELS +FSSPEPHLL+DD+ A    +++L+L++VSY+ P VEGSEPFHLGP+N
Sbjct: 301 QIAFRRIAELSRQFSSPEPHLLLDDTRAADKALHTLQLQDVSYTFPRVEGSEPFHLGPVN 360

Query: 361 LNIAQGDIVFIVGENGSGKTTLIKLLLGLYPPQSGEILLNGEAVTDPERDDYRQLFTTVF 420
           L+I QGDIVFIVGENG GKTTLIKLLLGLY PQ G I L+G+ VT   RDDYRQLFTT+F
Sbjct: 361 LSIKQGDIVFIVGENGCGKTTLIKLLLGLYAPQQGTISLDGKPVTAENRDDYRQLFTTIF 420

Query: 421 ADYYLFDDLVQGSATQSLDSATKYLERLEIAHKVSVKDGVFSTTDLSTGQRKRLALVNAW 480
           ADYYLFDD++QG      D A++YLERLEIAHKVS++DGVFSTTDLSTGQRKRLALV+AW
Sbjct: 421 ADYYLFDDVIQGDRPVPAD-ASRYLERLEIAHKVSIRDGVFSTTDLSTGQRKRLALVSAW 479

Query: 481 LEERPVLVFDEWAADQDPAFRRIFYTELLPDLKRLGKTIIVISHDDRYFDIADQLVRLRA 540
           LEERPVLVFDEWAADQDP FRRIFYTELLPDLKRLGKTIIVISHDDRYFD+ADQL+ + A
Sbjct: 480 LEERPVLVFDEWAADQDPTFRRIFYTELLPDLKRLGKTIIVISHDDRYFDVADQLIHMAA 539

Query: 541 GQV 543
           G+V
Sbjct: 540 GKV 542