Pairwise Alignments

Query, 550 a.a., cyclic peptide transporter from Pseudomonas simiae WCS417

Subject, 585 a.a., putative ABC transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 2e-26
 Identities = 133/561 (23%), Positives = 239/561 (42%), Gaps = 52/561 (9%)

Query: 19  FRTIVTVSVALGMAGGLAIT----LLLATINNALHSPQGMTQGVILTFAALCVLALVSSI 74
           +R  + ++V  G+  GL I+    L+L  +N+ +H+       +++  A L +       
Sbjct: 16  WRRYLLMTVLYGVFSGLTISTLAPLMLHLLNSEIHAASAW---LVVLAAGLTLCWAWRRQ 72

Query: 75  ISDIGTNYVGQRIIAALRKDLGEKVLSAPIGQIERYRSHRLIPVLTHDVDTISDF-SFAF 133
           +   G + +   ++   R+ +G +V   P+G      + RL  V+T     ++   +   
Sbjct: 73  VEKAGIS-LAVAVLQGGRQHIGAQVAQLPLGWFTPDNTARLGHVITQGTMAVAQLPAHVL 131

Query: 134 TPLAIAATVTLGCLGYLAYLSVPMFLMMVVAIVIGSAVQFIAGGKGIQGFDLARSHEDEL 193
           TPL  ++   L  L  L  L  P+ L+ ++A+   +AV   +   G +       H    
Sbjct: 132 TPLISSSVTPLVLLVALFILHPPLGLVALLALPALAAVLLFSARLGRRADHAFHQHFAAA 191

Query: 194 QRYYNAIASGAKELRMHRPRR--FRMNTHRIQETADRISDIQVRS-----VNIYILAKTF 246
            +     A     LR         R+    ++        + +R+     +N + +  TF
Sbjct: 192 SQRMVEFAQAQSVLRAFNGEGGGTRLLAQSLERQRSSGMGLIIRASLSALLNSWAVQATF 251

Query: 247 GSMLFFVVIGLALAMQAYNPNPDPT-VITGFVLVLLYMKGPLEHLLGYLPVVGKAKIAFG 305
            ++L  V  GL    QA     D   VI   VLV  ++  PL+ +  ++ ++   + A G
Sbjct: 252 AALL--VAAGLWFGDQAGGQAQDAVAVIVALVLVCRFID-PLQDVASHVEIL---RGAHG 305

Query: 306 RISELSERFSSPEPHLLMDDSEAPTPIVNSLELRNVS--YSPPAVEGSEPFHLGPINLNI 363
           ++ E+ ER  + +P  L + +    P+  ++ L+ VS  Y+P       P  L  +NL+I
Sbjct: 306 QLQEI-ERILAAKP--LPEPASPHRPVGGAINLQGVSLRYNPTG-----PDVLQNVNLHI 357

Query: 364 AQGDIVFIVGENGSGKTTLIKLLLGLYPPQSGEILLNGEAVTDPERDDYRQLFTTVFADY 423
             G +  ++G +GSGKT+L++L+   +    G + + G  V    R       + V  D 
Sbjct: 358 PAGSMTAVIGASGSGKTSLMRLIARFFDTTEGSVRIGGVDVRQMARASLTDTVSQVLQDT 417

Query: 424 YLFDDLV---------QGSATQSLDSA-----TKYLERLEIAHKVSVKDGVFSTTDLSTG 469
           +LF   +           S  + L +A        LERL      SV +G      LS G
Sbjct: 418 WLFQGSIADNIRIGKPDASDAEVLQAAHMAGLGHTLERLRGGLDTSVGEG---GAQLSGG 474

Query: 470 QRKRLALVNAWLEERPVLVFDEWAADQDPAFRRIFYTELLPDLKRLGKTIIVISHDDRYF 529
           +R+R+ +  A + + PVL+ DE  A  D   + +    L     R   T++VI+H     
Sbjct: 475 ERQRVTIARALIRQAPVLLVDEATAALDAENQAVIAQTLHSLHGRC--TLVVIAHQLSTV 532

Query: 530 DIADQLVRLRAGQVVHKMEPA 550
            +AD +V L AGQVV +  PA
Sbjct: 533 AMADHIVVLDAGQVVEQGTPA 553