Pairwise Alignments

Query, 550 a.a., cyclic peptide transporter from Pseudomonas simiae WCS417

Subject, 610 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score = 99.0 bits (245), Expect = 5e-25
 Identities = 136/543 (25%), Positives = 231/543 (42%), Gaps = 73/543 (13%)

Query: 41  LATINNALHSPQGMTQGVILTFAALCVLALVSSIISDIGTNYVGQRIIAALRKDLGEKVL 100
           L  +N+ L S   +  G I    AL +   ++++      N +  ++ A L KD+  ++ 
Sbjct: 75  LKWMNHLLPSSWQVAAGYIGLMLALTLCLRLAAL----AFNVIQSKLFAGLAKDIVYRLR 130

Query: 101 SAPIGQIER-----YRSHRLIPVLTH---DVDTISDFSFAFTPLAIAATVTL-GCLGYLA 151
              I +++R     Y S     V TH   D+DT+  F        + A +TL G    L 
Sbjct: 131 IRLIERLKRISLKEYESLGSGTVTTHLVTDLDTLDKFVGETLSRFLVAMLTLTGTAAILI 190

Query: 152 YLSVPMFLMMVV--AIVIGSAVQFIAGGKGIQGFDLARSHEDELQRYYNAIAS------- 202
           ++   + L++++   +VI   VQ    GK ++   L +   D   R+  A+A        
Sbjct: 191 WMHWQLALLILLFNPLVIYFTVQL---GKRVK--HLKKLENDSTARFTQALAETLDAIQE 245

Query: 203 -----------GAKELRMHRPRRFRMNTHRIQETADRISDIQVR-SVNIYILAKTFGSML 250
                      G   LR    R + +++    + + R S +  +  ++I+  A     + 
Sbjct: 246 IRAGNRQGYFLGRLGLRAREVRDYAVDSQWKSDASGRASGLLFQFGIDIFRAAAMLTVLF 305

Query: 251 FFVVIGLALAMQAYNPNPDPTVITGFVLVLLYMKGPLEHLLGYLPVVGKAKIAFGRISEL 310
             + IG  LA+ +Y               L +M GP+E LL        A  A  R++EL
Sbjct: 306 SDLSIGQMLAVFSY---------------LWFMIGPVEQLLNLQYAYYAAGGALSRLNEL 350

Query: 311 SERFSSPEPHLLMDDSEAPTPIVNSLELRNVSYSPPAVEGSEPFHLGPINLNIAQGDIVF 370
             R   P+     D       +   +E+R++ ++       EP  L  ++L+IA G+ V 
Sbjct: 351 LARADEPQYPAASDPFAGRETV--GIEVRDLRFA----YADEPV-LEHLDLSIAAGEKVA 403

Query: 371 IVGENGSGKTTLIKLLLGLYPPQSGEILLNGEAVTDPERDDYRQLFTTVFADYYLFDDLV 430
           IVG +G GK+TL++LLLGLY  Q+G I   G ++ +   +  R+    V     LF+D V
Sbjct: 404 IVGASGGGKSTLVQLLLGLYSAQAGTIRFGGASLQEIGLETLRENVAVVLQHPSLFNDSV 463

Query: 431 QGSATQSLD-SATKYLERLEIAHK----VSVKDGVFSTTD-----LSTGQRKRLALVNAW 480
           + + T   D S     + L IA       ++  G+ S        LS GQR+RLA+    
Sbjct: 464 RANLTMGRDCSDDACWQALRIAQLDATIAALPQGLDSVVGRSGVRLSGGQRQRLAIARMV 523

Query: 481 LEERPVLVFDEWAADQDPAFRRIFYTELLPDLKRLGKTIIVISHDDRYFDIADQLVRLRA 540
           L E  V++ DE  +  D A     +  L   L   G+T ++I+H       AD+++    
Sbjct: 524 LAEPKVVILDEATSALDAATEYNLHQALACFLS--GRTTLIIAHRLSAVKQADRVLVFDG 581

Query: 541 GQV 543
           G V
Sbjct: 582 GHV 584