Pairwise Alignments

Query, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 791 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  177 bits (450), Expect = 2e-48
 Identities = 194/828 (23%), Positives = 341/828 (41%), Gaps = 90/828 (10%)

Query: 29  LAVSLPVAGYVQAQEIELDIPAQALGSALQEFGRQANLQVLYSPTDVAGKNSTAIKGKLD 88
           L +S+  A   Q+      + A+ L  AL +F R   + V+Y+     G ++ A+ G++ 
Sbjct: 9   LPLSVAQAQEQQSARFNFALTAKPLPQALSDFSRVTGISVIYTDEAPYGLSAPAVNGQMS 68

Query: 89  PQQAINTLLAGTS-TTHSLSGNALTVTAAGASAGLELSPTQVTGNVLGNITEGSGSYTPG 147
             QA+  LL+ T  T   +    L +        + L  T ++G  +G   E S SY P 
Sbjct: 69  ATQALQRLLSNTGFTFRQIDARTLALEPVPTEGAVNLGATTISG--VGQQVEDSTSYQPP 126

Query: 148 TIATATRLTLTPRETPQSITVITRQHIEDFGLNNVDDVMRHTPGIT-VSAYDTDRTNYYS 206
             ++  R      ETPQ++ V+  Q + D    N+DD + +  GIT  +   + +     
Sbjct: 127 PTSSVMRSHALLLETPQTVNVVPAQVLRDQTPRNLDDALANISGITQANTLASTQDAVML 186

Query: 207 RGFSVN---SFQYDGIPSTVRNVGYSAGNTLSDMAIYDRVEVLKGATGLLNGAGSLGATI 263
           RGF  N   S   DG+P          G  L+  A  +RVEVLKG + LL G    G  +
Sbjct: 187 RGFGDNRNGSIMRDGMPIV-------QGRALN--ATAERVEVLKGPSSLLYGIQDPGGVV 237

Query: 264 NLIRKKPTSEFKGHVQLGAGSWDNYRS----EVDVSGPLTDSGNVRGRAVAAYQDKKSFM 319
           N++ KKP       + +   ++ + ++     +D +GP+ DSG +  R +  ++D + + 
Sbjct: 238 NIVSKKPELMRSTALTVRGSTFGDGKNGSGGSLDTTGPIGDSG-LAYRLIVDHED-EDYW 295

Query: 320 DHYSRKTETYYGITEFDLSPDTMLTVGFDYQDNIPKGSSWSGSFPLVNSNGSINKMPRSY 379
            ++    E+    +       T L   +++++ +      +   P  N    I   P + 
Sbjct: 296 RNFGTHRESLIAPSLAWYGDSTQLLFAYEHREFLTPFDRGTAIDPKTNHPLDI---PATR 352

Query: 380 NNGTTWSSWEQNTRTAFAMLEHDMGDGWVTKFQLDHKINSYHADLGSIQFVQPAADGTAE 439
                +++ E  +       +HD+ D W   F       +Y A    +  V   A+GT  
Sbjct: 353 RLDEPFNNMEGRSDLYRFEADHDLNDDWKAHFGYSWNRETYDASQVRVSAVN--ANGTLT 410

Query: 440 INGQKYTGETKSTSADLYAT----GPFSLFGREHELVVGGSIGTSRWQGKGYWSPEWPGG 495
              +K  G   + + D +AT    G  ++FG ++++V     G      K Y +      
Sbjct: 411 ---RKMDGTQGAITTDRFATASLEGKVNVFGLQNDVV----FGLDDEYRKIYRADLIRQS 463

Query: 496 NKVDFYNWNGHIAKPIYG---------PVQQYIDDTIRQTGYYMTTRLNVMDDLHVILGG 546
           ++   +N+N     P+YG         P      D +R    +    +++ +    + G 
Sbjct: 464 SRATSFNYN----NPVYGNEVAGTTVSPADSAQTDLLRSDSLFFQDAIHLNEQWIFVAGA 519

Query: 547 RVANY-HVTGINPSYKETGR-----FVPYAGVVYDLNDNISAYASYTDIFQPQESTYKDR 600
           R   Y    G    +K         +VP AG+VY   D +S Y SYT+ F+P  +     
Sbjct: 520 RYQMYDQYAGKGVPFKANTNGNGQAWVPRAGLVYRYTDELSFYGSYTESFKPNSTIAALA 579

Query: 601 NQKL----LEPDEGQNYELGLKGDFLDGRLNASVAYFEVHETNRAISDDAYNNQTPAPSN 656
           +       L P+E +++ELG K D + GR+ AS A F + + N  +S  +  N       
Sbjct: 580 DGSTLTGDLTPEESKSWELGAKLD-IPGRITASAALFNIDKRNVLVSVGSGANTV----- 633

Query: 657 YAFKGSKAVTKGYEAEVSGELSPGWQVQGGYTHKIVRDDNDKKISTFE-------PEHQV 709
           Y+  G +  ++G E + +G+L+    + G Y +    D  DK   T E        +H  
Sbjct: 634 YSIAG-QVRSRGLELDATGQLTDKVSLIGSYAYTDALDVKDKD-PTLEGNRLQNVAKHTG 691

Query: 710 NLNTTYKLKGDL---DQFTIGGGLRWQSKGWYEIYNSPLNTNQDITQKAYWLVDLMTRYQ 766
           +L   Y   G++   DQ  +G G R+      +  N       D T   Y + D    Y 
Sbjct: 692 SLAVAYDF-GNIFGGDQLRVGTGARYVGARAGDAAN-------DFTLPGYTVADAFATYD 743

Query: 767 VT---KNLSATVNFNNIFDKSYYTNVGFYNSAAYGEPRNVMFSTRWDF 811
                + +   +N  N+FD+ YYT+       + G+ R V  S+  +F
Sbjct: 744 TKIDGQKVKFQLNVKNMFDRVYYTSAASRLFVSMGDARQVSVSSTLEF 791