Pairwise Alignments

Query, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 717 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  434 bits (1115), Expect = e-125
 Identities = 271/724 (37%), Positives = 404/724 (55%), Gaps = 49/724 (6%)

Query: 107 SGNALTVTAAGASAGLELSPTQVTGNVLGNITEGSGSYTPGTIATATRLTLTPRETPQSI 166
           S  A+    A  +A LEL  TQ++   LG  TEG+ SYT G +ATAT+L LT RETPQ++
Sbjct: 24  SSPAVFAAEAEKAAPLELGATQISSEQLGQTTEGTQSYTTGAMATATKLPLTMRETPQAV 83

Query: 167 TVITRQHIEDFGLNNVDDVMRHTPGITVS-AYDTDRTNYYSRGFSVNSFQYDGIPSTVRN 225
           TVITRQ ++D  + +V+DV+++TPG+ +S +    R  Y SRGF +++  +DGIPS+   
Sbjct: 84  TVITRQRMDDQAMTSVNDVVKNTPGLFLSQSSGPGRHTYSSRGFDIDNMMFDGIPSSYS- 142

Query: 226 VGYSAGNTLSDMAIYDRVEVLKGATGLLNGAGSLGATINLIRKKPTSEFKGHVQLGAGSW 285
            GY A +   ++A++DRVEV++GATGL+ GAG+  A IN +RK+PT+  +  +   AGSW
Sbjct: 143 -GY-ANSVQPNLAMFDRVEVIRGATGLVTGAGNPSAAINFVRKRPTATPQVSITGAAGSW 200

Query: 286 DNYRSEVDVSGPLTDSGNVRGRAVAAYQDKKSFMDHYSRKTETYYGITEFDLSPDTMLTV 345
           D+YR E D S  L DSG +RGR V +Y+D  SF          +Y I E DLS +T  T+
Sbjct: 201 DDYRGEFDASSALNDSGTLRGRVVGSYRDANSFRKGEESDHGLFYAIGEADLSENTTATL 260

Query: 346 GFDYQDNIPKGSSWSGSFPLVNSNGSINKMPRSYNNGTTWSSWEQNTRTAFAMLEHDMGD 405
           GF  Q++  + + + G  P + ++G    +PRS N G+ W + +    T F  +EH   +
Sbjct: 261 GFSRQED--QTNFFWGGLP-IGTDGHHLNLPRSTNPGSDWENKKLTIDTVFGDIEHRFAN 317

Query: 406 GWVTKFQLDHKINSYHADLGSIQFVQPAADGTAEINGQKYTGETKSTSADLYATGPFSLF 465
            W    +L    +S   D       Q     T      +   + K    D + +GP   F
Sbjct: 318 DW----KLHIAGSSSQLDGVFTGTYQSRYQTTLARTAYQSHQDDKQYGLDTFLSGPVEAF 373

Query: 466 GREHELVVGGSIGTSRWQGKGY--WSPEWP-GGNKVDFY-NWNGHIAKPIYGPVQQYIDD 521
           GR HE+VVG S        K Y  +   +P  G K DF  N  GH              +
Sbjct: 374 GRTHEVVVGTSKRVYDATSKEYSPYDTNYPFNGAKPDFVRNGKGH--------------N 419

Query: 522 TIRQTGYYMTTRLNVMDDLHVILGGRV--ANYHVTGINPSYKETGRFVPYAGVVYDLNDN 579
              Q G Y+TTRLN+ D L VILG RV   +Y     +  YK T     YAGV+YDLND 
Sbjct: 420 ITTQDGVYLTTRLNLADPLKVILGARVDWYDYDDRQGDGDYKVTRNLTRYAGVIYDLNDQ 479

Query: 580 ISAYASYTDIFQPQESTYKDRNQKLLEPDEGQNYELGLKGDFLDGRLNASVAYFEVHETN 639
            S YASYTDIF PQ  T +D + K LEP  G+NYE+G+KG++ +G LNAS+A F++ + N
Sbjct: 480 YSVYASYTDIFTPQ--TNRDFSDKPLEPIVGENYEVGIKGEYFNGALNASLAVFQIDQKN 537

Query: 640 RAISDDAYNNQTPAPSNYAFKGSKAV-TKGYEAEVSGELSPGWQVQGGYTH---KIVRD- 694
           RA   +   +Q   P    ++ S  V ++G + E+ G L+  WQV GG+T+     ++D 
Sbjct: 538 RATLPE---SQAGCPIMTCYEASGMVRSQGIDLELQGALTENWQVGGGFTYTRAHYIKDT 594

Query: 695 ---DNDKKISTFEPEHQVNLNTTYKLKGDLDQFTIGGGLRWQSKGWYEIYNSPLNTNQDI 751
              +N+++  T  PE    L T+Y+ +G L++  +GG + WQS+ + ++  +  NT + +
Sbjct: 595 NASNNNQRFDTDTPERLFKLTTSYRFQGPLEKLRVGGNVYWQSRMYNDVVLANSNTYR-L 653

Query: 752 TQKAYWLVDLMTRYQVTKNLSATVNFNNIFDKSYYTNVG----FYNSAAYGEPRNVMFST 807
            Q +Y + D+M  YQV K+L   +N NNIFD++YY+ +G    +  +  YG PR+   + 
Sbjct: 654 EQGSYAVADVMAGYQVNKHLDLQLNVNNIFDRTYYSAIGNSPIWGPNDTYGNPRSFGVTA 713

Query: 808 RWDF 811
           ++ F
Sbjct: 714 KYSF 717