Pairwise Alignments

Query, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 705 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  181 bits (460), Expect = 1e-49
 Identities = 175/718 (24%), Positives = 302/718 (42%), Gaps = 82/718 (11%)

Query: 120 AGLELSPTQVTGNVLGNITEGS-GSYTPGTIATATRLTLTPRETPQSITVITRQHIEDFG 178
           AG+EL  T +TG       +G    Y     A+ATR   +  ETPQSI+V+++  +ED G
Sbjct: 28  AGIELQATSITGTADYETAQGPVQGYHATRSASATRTDTSIHETPQSISVVSKDVVEDIG 87

Query: 179 LNNVDDVMRHTPGI--TVSAYDTDRTNYYSRGFSVNSFQYDGIPSTVRNVGYSAGNTLSD 236
              + D + +  G+    +      T +  RGF+   F  +G P    N GY     + D
Sbjct: 88  ATRLQDALDYAGGVGRANNFGGQGLTTFTVRGFTTGEFYRNGFPI---NRGYP---NMPD 141

Query: 237 MAIYDRVEVLKGATGLLNGAGSLGATINLIRKKPTSEFKGHVQLGAGSWDN--YRSEVDV 294
               +R+EVL+G   +L G G  G T N++ K+P +E    V LG+   D    R+ +D 
Sbjct: 142 ANTIERLEVLRGPATMLYGRGDPGGTFNVVSKQPLAE--PTVTLGSQLDDQGMQRATLDA 199

Query: 295 SGPLTDSGNVRGRAVAAYQDKKSFMDHYSRKTETYYGITEFDLSPDTMLTVGFDYQDNIP 354
           SGPL + G +  R     +  ++F DH   +      +  +  + DT +    D+  N  
Sbjct: 200 SGPLDEQGRLAYRLNVVGEGGETFRDHVETERYGVTPVITWQATDDTKVIFEGDFMRN-- 257

Query: 355 KGSSWSGSFPLVNSNGSINKMPRSYNNGTTWSSWE-----QNTRTAFAMLEHDMGDGWVT 409
                  + PL            + +  T W   +      +   A    EH + D W  
Sbjct: 258 -------NHPLDRGLTRFTNQKGTASRDTFWGDKDVGKLHNDNNMAQLRFEHLLNDNWTL 310

Query: 410 --KFQ-LDHKINSYHADLGSIQFVQPAADG-TAEINGQKYTGETKSTSADLYATGPFSLF 465
              FQ LD  +     +  S+     AADG T   N      E     A L  TG FS  
Sbjct: 311 GGGFQWLDGTLQGNAIEANSL-----AADGHTLNRNFNYRKLEWTDKDAQLNLTGHFSTG 365

Query: 466 GREHELVVGGSIGTSRWQGKGYWSPEWPGGNKVDFYNWNGHIAKPIYGPVQQYIDDT--- 522
             +H L+ G            +   ++    +     +   I  P+YG  +  +  T   
Sbjct: 366 AFDHTLLTGVE----------FEDYDYKSIIQRSSAAYTSDIFNPVYGKPRPALTSTPTH 415

Query: 523 ----IRQTGYYMTTRLNVMDDLHVILGGRVANY------HVTGINPSYKETGRFVPYAGV 572
               ++    ++  ++ + + L V+ G R   +      +V G            P  G 
Sbjct: 416 DKENLKTYSAFIQDQVALTERLKVLAGARFERFEHEYETYVAGGKNWKASDNSVTPRVGA 475

Query: 573 VYDLNDNISAYASYTDIFQPQESTYKDRNQKLLEPDEGQNYELGLKGDFLDGRLNASVAY 632
           +YDL D ++ YA     F+P  +T         EP++G++YE+G+K + LD +L+   A 
Sbjct: 476 IYDLTDTLAIYADAARSFKP--NTGASSGGVGFEPEKGKSYEMGIKWEGLDRQLSVDAAI 533

Query: 633 FEVHETNRAISDDAYNNQTPAPSNYAFKGSKAVTKGYEAEVSGELSPGWQVQGGYTH--- 689
           +++ + N   +D       P   N      +  ++G++  V+G L+P W+V GGY +   
Sbjct: 534 YQIDKKNVLTTD-------PLDPNSKVAAGQVRSRGFDLNVAGNLTPEWRVIGGYAYLDA 586

Query: 690 KIVRDDNDKKISTFE--PEHQVNLNTTYKLK-GDLDQFTIGGGLRWQSKGWYEIYNSPLN 746
           ++ +D+  +  S     P +  +L   Y+ + G L    +G G ++  +   +  N+P +
Sbjct: 587 EVTKDNTIRVGSRLANIPRNSFSLLNVYEFQDGSLKGLGLGAGAKYVDERVGQTSNTPFS 646

Query: 747 TNQDITQKAYWLVDLMTRYQVTKNLSATVNFNNIFDKSYYTNVGFYNSAAY-GEPRNV 803
            +      AY +VDL++ Y+V   +   ++  N+F++ +     F N  AY GEPR V
Sbjct: 647 MD------AYAVVDLLSYYKVNDKVRLNLDVKNLFNRDFEEG-AFGNFYAYPGEPRTV 697