Pairwise Alignments

Query, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 817 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  199 bits (506), Expect = 5e-55
 Identities = 205/854 (24%), Positives = 343/854 (40%), Gaps = 91/854 (10%)

Query: 7   LSPLSKALTRALNINLLPSALALAVSLPVAGYVQAQ---EIELDIPAQALGSALQEFGRQ 63
           + PL++AL R L ++LL    A    +P  GY +     +   +IPA  L  AL  F   
Sbjct: 6   IQPLARALRRGLFVSLL----ATVPMVPTLGYAEESAEAQRSYNIPAGNLDQALNRFASA 61

Query: 64  ANLQVLYSPTDVAGKNSTAIKGKLDPQQAINTLLAGTSTTHSLSGNALTVTAAGASAGLE 123
           + + +    T   GK S  ++G+   +  +  LL G+      S    ++ A      L+
Sbjct: 62  SGILLSVDATLTEGKRSAGLQGRYGVESGLERLLMGSGLMAMQSQGGWSLQAVSNGGPLQ 121

Query: 124 LSPTQVTGNVLGNITEGSGSYTPGTIAT----ATRLTLTPRETPQSITVITRQHIEDFGL 179
           L  TQ++G       E +     G +AT     ++   +  E PQ+I VIT   I+  G 
Sbjct: 122 LGATQISGQ---QTQESAWGPVDGIVATRSASGSKTDSSLVEIPQTINVITAAEIKARGA 178

Query: 180 NNVDDVMRHTPGITVSAYDTDRTNYY----SRGFSVNSFQYDGIPSTVRNVGYSAGNTLS 235
            +V   + +TPG+T   +  DR   +    SRGFS      DG+     ++ Y  G+T  
Sbjct: 179 QSVTQALLYTPGMTAGGF-ADRVKLFDEPTSRGFSPTPLYLDGL-----HLPYGGGSTGG 232

Query: 236 DMAI----YDRVEVLKGATGLLNGAGSLGATINLIRKKPTSEFKGHVQLGAGSWDNYRSE 291
            + I     +R+EVLKG   +L G    G  +N++ K+P+      V L AG++++  + 
Sbjct: 233 ALQIEPYSLERIEVLKGPASVLYGQNQPGGIVNMVSKRPSETAIHQVVLEAGTYEHKGAA 292

Query: 292 VDVSGPLTDSGNVRGRAVAAYQDKKSFMDHYSRKTETYYGITEFDLSPDTMLTVGFDYQD 351
           +D+SGPL + G    R      D +  +++   K +       +  S +T +TV   YQ 
Sbjct: 293 IDLSGPLDEQGQFLYRLTGLANDGQDEINYVENKRQFIAPSLTWRPSDETSVTVFAQYQK 352

Query: 352 N--IPKGSSWSGSFPL-VNSNGSINKMPRSYNNGTTWSSWEQNTRTAFAM---LEHDMGD 405
           +  +P+      S  L  N NG I +       G       Q  R  +A+   + H + D
Sbjct: 353 DKGVPEAQGLPASGTLWDNPNGKIKRDVFIGEPGV-----NQYNREQYALGYEISHRLND 407

Query: 406 GWVTKFQLDHK--INSYHADLGSIQFVQPAADGTAEIN-----GQKYTGETKSTSADLYA 458
            W  K    +    + Y A L   +FV     G  +       G  +    K    D  A
Sbjct: 408 TWTLKQNARYAEVDDRYTAPLHGYRFVANPVSGVQDQRYLQRFGVDWAQNNKVFGVDSIA 467

Query: 459 TGPFSLFGREHELVVGGSIGTSRWQGKGYWSPEWPGGNKVDFYNWNGHIAKPIYGPVQQY 518
              F      H ++ G     S     G +    P    +D +       KP+YG    +
Sbjct: 468 QAEFDTGALSHTMIFGLDYYHSNSLFHGLYDRNPP---IIDLF-------KPVYGQRLNF 517

Query: 519 -----IDDTIRQTGYYMTTRLNVMDDLHVILGGRVANYHVTGINP-----SYKETGRFVP 568
                 D TI QTG YM  ++  +D   ++LGGR    +V    P        +   F  
Sbjct: 518 GQPYRWDRTITQTGLYMQDQIK-LDKWALVLGGRYDWANVVNKEPLTDTRFASKDQAFTG 576

Query: 569 YAGVVYDLNDNISAYASYTDIFQPQESTYKDRNQKLLEPDEGQNYELGLKGDFLDGRLNA 628
            AG+VY  ++ ++ + SYT+ F P   T  D NQK  +P  G  YE+G+K      +   
Sbjct: 577 RAGLVYLFDNGVAPFVSYTESFLPLAGT--DANQKPFKPSTGNQYEVGVKYQPPGQKSFV 634

Query: 629 SVAYFEVHETNRAISDDAYNNQTPAPSNYAFKGSKAVTKGYEAEVSGELSPGWQVQGGYT 688
            V+ +++ + N   ++       P  + ++ +     ++G E E    LS  W +    +
Sbjct: 635 QVSVYQLDQENVLTTN-------PVDTTFSTQSGAMRSRGVELEAKAVLSDAWDIVASAS 687

Query: 689 HKIVR--DDNDKKISTFEPEHQVNLN-------TTYKLKGDLDQFTIGGGL--RWQSKGW 737
              ++   DND +    E  H   ++         Y + GD     +G GL  R+  +  
Sbjct: 688 RNDIKYTKDNDGR----EGRHPAGISPLTASMWVNYSVLGDTPLAGLGAGLGVRYARQSL 743

Query: 738 YEIYNSPLNTNQDITQKAYWLVDLMTRYQVTKNLSATVNFNNIFDKSYYTNVGFYNSAAY 797
            + Y    +        A    DL       K +   +N  N+ +K+Y +         Y
Sbjct: 744 GDYYEGAFSVPSYSVYDASLSYDLSRSPLKLKGVKLAMNVQNLTNKTYVSQCTSNLDCYY 803

Query: 798 GEPRNVMFSTRWDF 811
           GE R V+ S  +D+
Sbjct: 804 GEGRTVVSSLTYDW 817