Pairwise Alignments

Query, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 820 a.a., TonB-dependent siderophore receptor from Variovorax sp. SCN45

 Score =  549 bits (1415), Expect = e-160
 Identities = 330/824 (40%), Positives = 462/824 (56%), Gaps = 51/824 (6%)

Query: 22  LLPSALALAVSLPVAGYVQAQEI-------ELDIPAQALGSALQEFGRQANLQVLYSPTD 74
           L P ALA A++  + G  QAQ         +L I AQA+G AL E  RQA LQ+++ P  
Sbjct: 14  LAPLALAAALAAGLCGPAQAQASAAFHTSRDLAIGAQAMGPALNELARQAGLQLMFPPAL 73

Query: 75  VAGKNSTAIKGKLDPQQAINTLLAGTSTTHSLSGNALTVTAAG-ASAGLELSPTQVTGNV 133
           VAGK + A+ G+L P+QA++ LLAG+     L+G+A+ V  A  A+AG   +   VT + 
Sbjct: 74  VAGKTAPAVSGRLTPRQAVDRLLAGSGLAAELNGDAVVVKPAPPAAAGDHSTLPAVTVSA 133

Query: 134 LG---NITEGSGSYTPGTIATATRLTLTPRETPQSITVITRQHIEDFGLNNVDDVMRHTP 190
            G    ITE +GSYT       TR+ L+ RETPQS++V+ RQ IED  L  + DV+R TP
Sbjct: 134 EGPSDGITESTGSYTTRATGAGTRMALSLRETPQSVSVVGRQQIEDQNLTTLVDVLRQTP 193

Query: 191 GITVSAYDTDRTNYYSRGFSVNSFQYDGIPSTVRNVGYSAGNTLSDMAIYDRVEVLKGAT 250
           GI     D +R ++ SRGF++ +   DG+P+   N   +  ++++  +IYDRVEV++GA 
Sbjct: 194 GIVADRLD-ERVSFSSRGFALGTM-IDGVPTLSYNT-VAGESSMASTSIYDRVEVIRGAA 250

Query: 251 GLLNGAGSLGATINLIRKKPTSEFKGHVQLGAGSWDNYRSEVDVSGPLTDSGNVRGRAVA 310
           GLLNGAGS G ++NL+RK+PT+EF GHV  G GSW+ Y SEVDV G L  +G VRGR VA
Sbjct: 251 GLLNGAGSPGGSVNLVRKRPTAEFSGHVTAGFGSWNRYTSEVDVGGSLNAAGTVRGRVVA 310

Query: 311 AYQDKKSFMDHYSRKTETYYGITEFDLSPDTMLTVGFDYQDNIPKGSSWSGSFPLVNSNG 370
           ++    SF+++  ++ + +YGI E D++P T+LT G++YQ     G+++ G  PL   NG
Sbjct: 311 SHTAGDSFIENKKQREDVFYGIAEMDVAPGTLLTAGYEYQKTGIDGANF-GQAPLFYRNG 369

Query: 371 SINKMPRSYNNGTTWSSWEQNTRTAFAMLEHDMGDGWVTKFQLDHKINSYHADLGSIQF- 429
              ++PRSYN+ T WS+W+  T+  F  L+H  G+GW  K    +  N      G +   
Sbjct: 370 LATQLPRSYNSSTPWSTWDMTTQRLFVNLDHRFGNGWRLKADAAYAKNDRERFSGDLWLY 429

Query: 430 ---VQPAAD-GTAEINGQKYTGETKSTSADLYATGPFSLFGREHELVVGGSIGTSRWQGK 485
              + P+A+ G  ++         K  S D+YATGPF LFGR HE  VG +I    + G 
Sbjct: 430 PANISPSANLGLVQLANNPANSTNK--SLDVYATGPFDLFGRTHEASVGFNINRYDY-GY 486

Query: 486 GYWS--PEWPGGNKVDFYNWNGHIAKPIYGPVQQYIDDTIRQTGYYMTTRLNVMDDLHVI 543
           G W   P       V  ++  G IA+P +     + D T  + G Y   R   +D L V+
Sbjct: 487 GNWGAVPNAFDRRTVSIFSL-GSIAQPAFNYPLNHFDGTTEEKGLYAAARFKPLDALSVL 545

Query: 544 LGGRVANYH--------------VTGINPSYKETGRFVPYAGVVYDLNDNISAYASYTDI 589
           +GGRV+ Y                   N   KE   F PY GVVYDL+   S YASYTDI
Sbjct: 546 VGGRVSWYENQSSQRLWTNGTRGALVTNKPVKEDAVFTPYVGVVYDLSKEYSLYASYTDI 605

Query: 590 FQPQESTYKDRNQKLLEPDEGQNYELGLKGDFLDGRLNASVAYFEVHETNRAISDDAYNN 649
           FQP  +T +D + ++L+P  G N ELG+KG+   GRLN S A F   E N A+ D     
Sbjct: 606 FQP--NTVRDASNQVLDPKRGTNSELGIKGEHWGGRLNTSFAVFRTQEDNLAVLDSGAPL 663

Query: 650 QTPAPSNY-AFKGSKAVTKGYEAEVSGELSPGWQVQGGYTHKIVRDDNDKKISTFEPEHQ 708
                + Y A KG++  +KG+E  VSGEL+ GWQV GGYT+   RD+ D  ++   P   
Sbjct: 664 LADGTAPYRAVKGAR--SKGFEFTVSGELARGWQVMGGYTYHAKRDNKDVLLNPTYPRRL 721

Query: 709 VNLNTTYKLKGDLDQFTIGGGLRWQSKGWY-EIYNSPLNTNQDITQKAYWLVDLMTRYQV 767
             + T+Y+  GD    TIGG + +QS  +Y E Y +   T   +T     L+ LM RY+ 
Sbjct: 722 FRVATSYRFPGDWSALTIGGSVSYQSDIYYDESYGTGRATQGGLT-----LISLMARYEF 776

Query: 768 TKNLSATVNFNNIFDKSYYTNVGFYNSAAYGEPRNVMFSTRWDF 811
           +K LSAT+N  N+ DK YYT +G YN   YG PRN      + F
Sbjct: 777 SKQLSATLNIENLSDKRYYTGLGGYNGYTYGAPRNAWLKATYKF 820