Pairwise Alignments

Query, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 796 a.a., putative Outer membrane ferric siderophore receptor from Pseudomonas putida KT2440

 Score =  177 bits (448), Expect = 3e-48
 Identities = 208/835 (24%), Positives = 344/835 (41%), Gaps = 108/835 (12%)

Query: 28  ALAVSLPVAGYVQAQEIELDIPAQALGSALQEFGRQANLQVLYSPTDVAGKNSTAIKGKL 87
           A AV+       Q Q      PAQ L  AL  F R     V+Y+  ++ G  + A+ G+ 
Sbjct: 19  AFAVAPLATAAEQLQAYAFAQPAQPLAQALNAFSRTTGQSVVYT-LELPGVQAPALNGRF 77

Query: 88  DPQQAINTLLAGTSTT-HSLSGNALTVTAAGASAGLELSPTQVTGNVLGNITEGSGSYTP 146
             +QA+  LL         +    LT+  A  S  L L  T VT  +         SY P
Sbjct: 78  SAEQALQQLLGNAGLAWRRVDARTLTLEPADTSGALSLQATTVTSQL------DDYSYQP 131

Query: 147 GTIATATRLTLTPRETPQSITVITRQHIEDFGLNNVDDVMRHTPGITV-SAYDTDRTNYY 205
              A+  R     ++ PQ+I V+  Q I D    N+DD + +  GIT  + +        
Sbjct: 132 PASASIMRGQGPNQDIPQAINVVPAQVIRDQAPRNLDDALANVSGITQGNNFGGTSDTVM 191

Query: 206 SRGFSVN---SFQYDGIPSTVRNVGYSAGNTLSDMAIYDRVEVLKGATGLLNGAGSLGAT 262
            RGF  N   S   DG+P          G  L+  A  +RVEVLKG   LL G    G  
Sbjct: 192 KRGFGDNRDGSIMRDGMPVV-------QGRNLN--ASTERVEVLKGPASLLYGIQDPGGV 242

Query: 263 INLIRKKPTSEFKGHVQLGAGSWDNYRS----EVDVSGPLTDSGNVRGRAVAAYQDKKSF 318
           IN++ K+P  +    + +   ++ + ++     +D +G L DS N   R V  ++D + +
Sbjct: 243 INVVSKRPQLQQYNALTVRGSTYGSGKNGSGGGLDSTGALGDS-NFAYRLVVDHED-EDY 300

Query: 319 MDHYSRKTETYYGITEFDLSPDTMLTVGFDYQDNI---PKGSSWSGSFPLVNSNGSINKM 375
             +Y    E+    +   L  DT + + +++++ +    +G+++        +NG    +
Sbjct: 301 WRNYGVHRESLVAPSLAWLGEDTQVVLAYEHREFLYPFDRGTAF-------GNNGHPLNI 353

Query: 376 PRSYNNGTTWSSWEQNTRTAFAMLEHDMGDGWVTKFQLDHKINSYHADLGSIQFVQPAAD 435
           P +      ++  E  +      ++H + D W   F       +Y A        Q    
Sbjct: 354 PATRRLDEPFNDMEGRSDLYRLEVDHQLADDWKLHFGYSFNRETYDAS-------QVRVT 406

Query: 436 GTAEING---QKYTGETKSTSADLYAT----GPFSLFGREHELVVGGSIGTSRWQGKGYW 488
           G  E  G   +   G   + S D + T    G   L G +H+L+ G      R   +G  
Sbjct: 407 GVNETQGTLTRSIDGTHNAMSRDQFVTLSLNGNVELAGMQHDLLFGID-HEDRKIFRGDL 465

Query: 489 SPEWPGGNKVDFYNWNGHIAKPIYGPVQQYIDDTIR-----QTGYYMTTRLNVMDDLH-- 541
             + P                P+YG  Q+     +R     QT    T  L V D LH  
Sbjct: 466 IRQTPQS--------TFSYLDPVYG--QEVEGTNVRASDSDQTDKLRTDALFVQDALHLD 515

Query: 542 ----VILGGRVANY-HVTGINPSYKET-----GRFVPYAGVVYDLNDNISAYASYTDIFQ 591
               ++ G R   Y    G    +K         +VP+AG+VY ++D +S Y SY++ F+
Sbjct: 516 EHWILVAGARFQQYDQYAGRGRPFKANTDISGQAWVPHAGIVYKVDDQLSFYGSYSESFK 575

Query: 592 PQESTYKDRNQKLLE----PDEGQNYELGLKGDFLDGRLNASVAYFEVHETNRAISD-DA 646
           P  +        +L+    P+EG+ +ELG K D + GR+  ++A F++ + N  +S+ DA
Sbjct: 576 PNSTIAPLTGNVVLDSSVAPEEGKAWELGAKLD-MPGRITGTLALFDITKRNVLVSNFDA 634

Query: 647 YNNQTPAPSNYAFKGSKAVTKGYEAEVSGELSPGWQVQGGY--THKIVRDDNDKKISTFE 704
             ++T     Y+  G +  ++G E +V+G+LS  W + G Y  T   V  D D + +  +
Sbjct: 635 VTSETV----YSNAG-EVSSRGVELDVTGQLSERWSLIGSYALTDAKVTKDPDLEGNRLQ 689

Query: 705 --PEHQVNLNTTYKLKGDL---DQFTIGGGLRWQSKGWYEIYNSPLNTNQDITQKAYWLV 759
               H  +L+  Y   G L   D+   G G R+       +     N        +Y + 
Sbjct: 690 NVARHSGSLSAVYDF-GSLFGSDRLRFGAGARY-------VGERSGNATNTFDLPSYTVA 741

Query: 760 DLMTRYQV---TKNLSATVNFNNIFDKSYYTNVGFYNSAAYGEPRNVMFSTRWDF 811
           D    Y+      N+   +N  N+FDK YY++       A G+ R V  S+ ++F
Sbjct: 742 DAFATYETKLDEHNVRLQLNVKNLFDKVYYSSAVNQYFVAIGDARQVSLSSTFEF 796