Pairwise Alignments

Query, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

Subject, 810 a.a., Outer membrane ferric siderophore receptor from Pseudomonas putida KT2440

 Score =  440 bits (1132), Expect = e-127
 Identities = 284/822 (34%), Positives = 433/822 (52%), Gaps = 62/822 (7%)

Query: 27  LALAVSLPVAGYVQ---------AQEIELDIPAQALGSALQEFGRQANLQVLYSPTDVAG 77
           LALA+ L + G+V          AQ +  DIPA  L   L     QA L +       A 
Sbjct: 14  LALAIFLALGGHVAVAEADSSAAAQRVVFDIPAGPLARQLNLLASQAGLLIGGDAALTAN 73

Query: 78  KNSTAIKGKLDPQQAINTLLAGTSTTHSLSGNA---LTVTAAGASAGLELSPTQVTGNVL 134
           K S A+   L    A+  +LAGT      +G     L   A  A+  + L  T ++G  L
Sbjct: 74  KQSQAVHA-LSVDVALAQMLAGTGVAAVRTGEREFQLVSQAEDAAGAVTLGATTISGQGL 132

Query: 135 GNITEGSGSYTPGTIATATRLTLTPRETPQSITVITRQHIEDFGLNNVDDVMRHTPGITV 194
           G +TE +G+Y  G  +TAT+L ++ RETPQS+TV+TRQ ++D  + N+DDVMR+  G+T+
Sbjct: 133 GAVTEATGAYATGRSSTATKLPMSLRETPQSVTVVTRQRMDDQNMKNLDDVMRNATGVTI 192

Query: 195 SAYDTDRTNYYSRGFSVNSFQYDGIPSTVRNVGYSAGNTLSDMAIYDRVEVLKGATGLLN 254
               ++R+ Y +RG +V++ Q DG+P+ + N       +  +  IYDRVEV++GATGL+ 
Sbjct: 193 IKNGSERSLYQARGQTVDNLQIDGVPTNIGNPYSMDTISKPNTDIYDRVEVVRGATGLME 252

Query: 255 GAGSLGATINLIRKKPTSEFKGHVQLGAGSWDNYRSEVDVSGPLTDSGNVRGRAVAAYQD 314
           GAG+  A+INL+RK+PT+E +  ++   GSWD+Y++ VD+S PL ++G +RGR+V  Y +
Sbjct: 253 GAGNPSASINLVRKRPTAERQALIETSVGSWDDYKTMVDLSAPLNEAGTLRGRSVITYNN 312

Query: 315 KKSFMDHYSRKTETYYGITEFDLSPDTMLTVGFDYQDNIPKGSSWSGSFPLVNSNGSINK 374
             S++D   ++ + +YGI E DL+  T+ T GF YQ     G  WSG  P   S G+   
Sbjct: 313 ANSYLDTAQKENQLFYGIIEADLAESTLATFGFTYQKERNSGYDWSG-LPSKES-GAFYP 370

Query: 375 MPRSYNNGTTWSSWEQNTRTAFAMLEHDMGDGWVTKFQLDHKINSYHADLGSIQFVQPAA 434
           + RS +    W+  ++   T FA ++H   +GW     + +++ +    LG+  +     
Sbjct: 371 VSRSTSLTGDWNHLDKRNTTVFADIQHTFANGWKGVVAV-NQMWAKSDFLGNYTYPGGGP 429

Query: 435 DGTAEINGQKYTGETKSTSADLYATGPFSLFGREHELVVGGSIGTSRWQGKGYWSPEWPG 494
           D    +N + +  +   TS D Y TGPF L GR+HEL+VGG+     W    +   ++ G
Sbjct: 430 D-LFTLNPRHFHFDDTQTSIDGYFTGPFQLLGRQHELIVGGN-----WNKDDF---DYHG 480

Query: 495 GNKVDF---YNWNGHIA----KPIYGPVQQY-IDDTIRQTGYYMTTRLNVMDDLHVILGG 546
           G    +    + N   A    KP    V Q+  + T  Q G Y+ +R ++ D    ILG 
Sbjct: 481 GRDATYRYIVDMNNLAAFDPPKPTALNVNQWQYNRTQEQKGVYVASRFSLTDSTTFILGS 540

Query: 547 RVANYHVTGINPS-----------YKETGRFVPYAGVVYDLNDNISAYASYTDIFQPQES 595
           R++ Y    ++ +           + ++G   PYAG+V DLN+N SAYASYT+IF+PQ +
Sbjct: 541 RLSWYSHDSLDDTNGVREPTDHKHFSKSGEVTPYAGLVQDLNENWSAYASYTEIFKPQSA 600

Query: 596 TYKDRNQKLLEPDEGQNYELGLKGDFLDGRLNASVAYFEVHETNRAISDDAYNNQTPAPS 655
             +D     L+P  G NYE+GLKG+FLD RL  ++A F+  +T RA         T A +
Sbjct: 601 --QDAEGTTLQPMTGSNYEIGLKGEFLDKRLQTAIALFQADQTGRA------ERVTCAQT 652

Query: 656 NYAFKGS-KAVTKGYEAEVSGELSPGWQVQGGYTHK----IVRDDNDKKISTFEPEHQVN 710
              ++ S K   KG E E++GE+   W V  GYT+     I  +   +  +   P H   
Sbjct: 653 WACYRASDKVRNKGIELELTGEVLANWNVSAGYTYTQSKYIGGEQKGEDFNGASPRHLFK 712

Query: 711 LNTTYKLKGDLDQFTIGGGLRWQSKGWYEIYNSPLNTNQDITQKAYWLVDLMTRYQVTKN 770
           + T Y+L G L+Q  +GG    QSK    +  + +  +  I Q AY L +L   Y++ K 
Sbjct: 713 VATDYRLPGALNQLRVGGSFYAQSK----MTQTEVGEDYKIQQDAYHLTNLHAIYEINKR 768

Query: 771 LSATVNFNNIFDKSYYTNVGFYNS-AAYGEPRNVMFSTRWDF 811
           L    N +N+FDK YY  +G  N    YGEPRN   + R  F
Sbjct: 769 LEVQYNLDNVFDKKYYQTLGNPNYWNFYGEPRNFNVALRARF 810