Pairwise Alignments

Query, 451 a.a., multidrug transporter MATE from Pseudomonas simiae WCS417

Subject, 465 a.a., multidrug efflux protein from Agrobacterium fabrum C58

 Score = 84.7 bits (208), Expect = 6e-21
 Identities = 109/450 (24%), Positives = 198/450 (44%), Gaps = 40/450 (8%)

Query: 14  LIFLAPMVLSNFLQSFSGTLNGIYVGQMLGTQALAAVSGMFPIVFFFIALVIGLGAGASV 73
           L+   P++ +   Q    T + + VGQ LG + LAA+  +    FFF+  + G G   +V
Sbjct: 25  LVLGIPLIGAQLAQLGIHTTDMVIVGQ-LGAEKLAAM--VLAGQFFFVVFIFGSGFSVAV 81

Query: 74  --LIGQAWGAQETAMVKAITGATLTLGALVGVVAAVLG-SLF--ARPALQALGTPVDVLD 128
             ++ QA+G  +    +     +L +G  V +   +L   +F  A   L  LG   +V  
Sbjct: 82  VPMVAQAYGQGDATSARR----SLRMGMWVAIAYWLLALPIFFNAERILVYLGQNPNVAA 137

Query: 129 DAVGY-AQKMMLIMPLLLVFILYTQLLRGVSDTISPLLALMVSTLVGL----LLTPALIR 183
               Y A     ++P LL ++L     RG+   I     ++  T++ L    L+   L+ 
Sbjct: 138 LTGHYLAIAKFGLLPALLFYVL-----RGLVSAIGRAGIILYVTIIMLVMNGLMAYVLVF 192

Query: 184 GWVGLPPMGIQSAVYAGLVGNALAMLFLILRLRHKNHVMAPDRELLAALRLDRVILGKVL 243
           G  GLP MG+  A    ++ NA + +F++  ++ +      +   +   R D   L +VL
Sbjct: 193 GHFGLPAMGMNGAAVVAVIVNAFSFIFIVAYVQTREETKKYEL-FVRFWRPDWHALFEVL 251

Query: 244 RIGLPTGLQMVVLSLSELVILA----LVNGHGSQATAAYGAVTQIVNYVQFPALSIAITA 299
           R+GLP  + +    L+E+ + A    L+   G+   AA+G   Q+ +      L ++  A
Sbjct: 252 RLGLPISITI----LAEVTLFAAASILMGQIGTVQLAAHGIALQLASIAFMIPLGLSQAA 307

Query: 300 SILGAQAIGAGRLERI--GPILRTGLLINTCLTGGLI--VLGYVLSHWLLGLFITDDAAR 355
           ++    A G G  + +    I+   +     L GG++   +   L+ W L   +  +AA 
Sbjct: 308 TVRVGVARGQGDFKNLIRASIMIYAIACGIALCGGILFAAVPEFLAKWFLDPKL-PEAAE 366

Query: 356 VNAEHLLHIMLWSI--LVFGFQAVIGGIMRASGVVLMPVVISIFCVLCVELPMAYLL--N 411
           V A     +++  I  LV G QAV  G++R      +P ++++     + L +A+ +   
Sbjct: 367 VLAYASSLVVIAGIFQLVDGIQAVTAGLLRGLKDARIPAMLALISYWPIGLALAWTMAFP 426

Query: 412 AHFGLEGVWMAFPVTYLAMLALQTAYYRLV 441
             FG  GVW  F +       L T  + L+
Sbjct: 427 LGFGGRGVWFGFVIGLSTAAVLLTVRFVLL 456