Pairwise Alignments

Query, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  223 bits (569), Expect = 1e-62
 Identities = 164/551 (29%), Positives = 283/551 (51%), Gaps = 29/551 (5%)

Query: 5   MSLAMRIGLGFASTLSLLVLITAVGIQRVGFIDSTLKDVGEKAAVVQRYAINFRGSVHNR 64
           M + +R  L F    SLLV++   G+ ++         + + A V++   +    ++H+ 
Sbjct: 6   MRIGLRASLSFGVLASLLVIVGMFGLGQMA-------KLRQSALVIEASWMPSIENIHDS 58

Query: 65  AIAIRDAVL------VKDEAALNRHLAEIDQLKRDYQDSAVMLDRLFANTTASAEETRLL 118
           A  +    L        DE+ +  +   +  + R + +   +LD       +  EE  +L
Sbjct: 59  AAIVASIRLEALRLATTDESRIRDNSKAL--ITRQHTELQTLLDH-HKTLLSGDEEREML 115

Query: 119 GDIKAIETQALASTERVINLRRSNDTAGAQDLLLAQASVHYTEWLKRVNALIDFEEAHIK 178
             ++      L+   +++ L   +    A DLL ++ +       K +  +I F ++ ++
Sbjct: 116 TQLEGNANAYLSLVGQIVALVDKDQQQDAIDLLNSRLAPQGVILNKSLTDMITFNQSGVQ 175

Query: 179 QRLDTVQSAAGTFAMLMVLASAV---AIILSVLVSLLIIRKVKATLGAEPEEVAEAIRRL 235
             +D   SAA T++    +  ++   A+  ++L++ L+ R + A LG    +     R +
Sbjct: 176 TAVD---SAAQTYSSAQWIVGSIIVLALTATLLLAWLLTRSITAPLG----QALIVARTI 228

Query: 236 ADGELNQRIETR---YPDSVMGILKNALARLSDTISEVRSAAQALRHSSVTLLSVASDNR 292
           A G+L+Q I       P  ++  L    A+L  T+  +  +AQ L  ++  + SV   + 
Sbjct: 229 ASGDLSQPIAVSGKDEPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVMEQST 288

Query: 293 QQINLQTSEAQHVAAAITQMAASVSEVSGYASAASKATILADAEVDSGHRLVGEVTVSIE 352
           + +  Q  E +  A A+T+M+A+V EV+G A ++++A+  +D +   GH  + E   SI+
Sbjct: 289 RDLQAQNDEIEQAATAVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETISSIQ 348

Query: 353 ELATILDHATLRVNQVSSDSENIETVIEVINAIAAQTNLLALNAAIEAARAGEHGRGFAV 412
            L   +  A+ +   ++  +++I  V+EVI  IAAQTNLLALNAAIEAARAGE GRGFAV
Sbjct: 349 NLVDEVLGASNKAEGLAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAV 408

Query: 413 VADEVRSLATRTQESTQEIRDMIGKLQSGTQDAADIMQRSRSLAQTTVTQTRDSQLALGK 472
           VADEVRSLA RTQ+ST+EI  MI  +Q GTQ   + +  S   A  T+ +   +  AL K
Sbjct: 409 VADEVRSLAQRTQDSTEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSALEK 468

Query: 473 ISQEVGAINAMNAQIASVSVQQSAAAEEVAQNVTRIHSSTVQSAAGSEQVENSNHELAEL 532
           I+  +  I+  N  IAS + QQ+  A +V +++  I   + Q+AAG+ Q   ++ EL+ L
Sbjct: 469 ITAAISQISQRNLVIASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQELSRL 528

Query: 533 ADRLSTKVAFF 543
           A  L+  VA F
Sbjct: 529 AVDLNGLVARF 539