Pairwise Alignments

Query, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  239 bits (610), Expect = 2e-67
 Identities = 159/433 (36%), Positives = 242/433 (55%), Gaps = 40/433 (9%)

Query: 128 ALASTERVINLRRSNDTAGAQDLLLAQASV-----HYTEWLKRVNALIDFEEAHIKQRLD 182
           +L +    ++  R + TA A  L +  A       H  +       + D + AH KQ   
Sbjct: 231 SLQAYRAAVSQYRDSQTAAAAALKIMSAQGDTLLGHSDKLTLSQTVVRDADAAHAKQ--- 287

Query: 183 TVQSAAGTFAMLMVLASAVAIILSVLVSLLIIRKVKATLGAEPEEVAEAIRRLADGELNQ 242
                      L++LA+ +A+I  ++ +  I R++   L     +  +  +R+A G+L+ 
Sbjct: 288 -----------LLLLATVLALIFGLVAAWAITRQIVIPLN----QTLQVAQRVASGDLSH 332

Query: 243 RIETRYPDSVMGI----------LKNALARLSDTISEVRSAAQALRHSSVTLLSVASDNR 292
            + +   D +  +          L+  +  +SD ++++ SAA+ L  S+VT  + A  N 
Sbjct: 333 NLTSMRQDELGQLQRAMQSMTVGLRELIGGISDGVTQIASAAEQL--SAVTEQTSAGVNS 390

Query: 293 QQINLQTSEAQHVAAAITQMAASVSEVSGYASAASKATILADAEVDSGHRLVGEVTVSIE 352
           Q++     E   VA A+ +MAA+V EV+  A  AS+A + AD +   G ++VGE    IE
Sbjct: 391 QKV-----ETDQVATAMNEMAATVQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIE 445

Query: 353 ELATILDHATLRVNQVSSDSENIETVIEVINAIAAQTNLLALNAAIEAARAGEHGRGFAV 412
            LAT + ++T+ +  +  +S+ I +V++VI ++A QTNLLALNAAIEAARAGE GRGFAV
Sbjct: 446 RLATEVGNSTVAMGDLKRESDKIGSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAV 505

Query: 413 VADEVRSLATRTQESTQEIRDMIGKLQSGTQDAADIMQRSRSLAQTTVTQTRDSQLALGK 472
           VADEVRSLA RTQ+ST+EI ++I  LQSGTQ  A IM  SR L  ++V   R +  AL  
Sbjct: 506 VADEVRSLAQRTQKSTEEIEELIVGLQSGTQQVATIMDNSRGLTDSSVELPRRAGSALAS 565

Query: 473 ISQEVGAINAMNAQIASVSVQQSAAAEEVAQNVTRIHSSTVQSAAGSEQVENSNHELAEL 532
           I++ V  I AMN+QIA+ + QQSA AEE+ ++V  +   + Q+AA SE+   S+ ELA L
Sbjct: 566 ITRTVSTIQAMNSQIATAAEQQSAVAEEINRSVLNVRDVSEQTAAASEETAASSTELARL 625

Query: 533 ADRLSTKVAFFNV 545
              L   V  F V
Sbjct: 626 GTHLQALVGRFRV 638



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 13/134 (9%)

Query: 353 ELATILDHATLRVNQVSSDSENIETVIEVINAIAAQTNLLALNAAIEAARAGEHGRGFAV 412
           +L    D+A  +V++V       ++V +         +++ L+  I+ AR    G  ++ 
Sbjct: 139 KLGDTADNAVAKVSEVEKSLLQGDSVTQF-------NSVVDLSKLIQQARFQVRGYTYSA 191

Query: 413 VADEVRSLATRTQESTQEIRDMIGKLQSGTQDAADIMQRSRSLAQTTVTQTRDSQLALGK 472
             +  +        + ++I ++ G+L +  Q   +    S    +  V+Q RDSQ A   
Sbjct: 192 KVEAEQPALDAIDNAVKKITELQGQLPAQYQANLEEASTSLQAYRAAVSQYRDSQTA--- 248

Query: 473 ISQEVGAINAMNAQ 486
                 A+  M+AQ
Sbjct: 249 ---AAAALKIMSAQ 259