Pairwise Alignments

Query, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  215 bits (547), Expect = 4e-60
 Identities = 171/553 (30%), Positives = 287/553 (51%), Gaps = 33/553 (5%)

Query: 5   MSLAMRIGLGFASTLSLLVLITAVGIQRVGFIDST---LKDVGEKAAVV--QRYAINFR- 58
           M++A R  LGFA    L++ +    + ++G I      ++ V   +  +  +  A+N R 
Sbjct: 6   MNIAPRALLGFALIGLLMLGLGIFSLVQMGNIRQAGVAIEQVSVPSIKILDELTALNLRM 65

Query: 59  GSVHNRAIAIRDAVLVKDEA-ALNRHLAEIDQLKRDYQDSAVMLDRLFANTTASAEETRL 117
            ++  R +  R+    +D    L++  ++ID+ ++ Y    V  D       A  +  +L
Sbjct: 66  RTLSYRLLLNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADE----QAAFDQYGQL 121

Query: 118 LGDIKAIETQ--ALASTERVINLRRSNDTAGAQDLLLAQASVHYTEWLKRVNALIDFEEA 175
           L   + +E++   L+  +R+  LR         DLL      +  +  K ++ L+     
Sbjct: 122 LNQYRQLESRMRTLSQADRLDELR---------DLLNRDLLANSEQINKVMDTLVRINTD 172

Query: 176 HIKQRLDTVQSA-AGTFAMLMVLASAVAIILSVLVSLLIIRKVKATLGAEPEEVAEAIRR 234
             +   +   +  AG FA+++ L  A A +L+   + L+ R +   +    EE  +   +
Sbjct: 173 QTRATNEKAANQYAGAFALVIGLLVA-ATVLTFACAFLLTRSIVKPI----EEALKCAEQ 227

Query: 235 LADGELNQRIETRYPDSVMGILKNALAR----LSDTISEVRSAAQALRHSSVTLLSVASD 290
           +ADG+L   I     D    +L+ A+AR    L DT+ ++  +A  L  ++  L +V  +
Sbjct: 228 VADGDLTHVIRAEGTDEAARLLR-AMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDE 286

Query: 291 NRQQINLQTSEAQHVAAAITQMAASVSEVSGYASAASKATILADAEVDSGHRLVGEVTVS 350
           + + +  Q +E +  A A+T+M ++V EV+  A + S+A+  A      G  LV E   +
Sbjct: 287 SARGLQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGA 346

Query: 351 IEELATILDHATLRVNQVSSDSENIETVIEVINAIAAQTNLLALNAAIEAARAGEHGRGF 410
           IE ++  +      +  ++  S +I  V++VI  +A QTNLLALNAAIEAARAGE GRGF
Sbjct: 347 IERMSGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGF 406

Query: 411 AVVADEVRSLATRTQESTQEIRDMIGKLQSGTQDAADIMQRSRSLAQTTVTQTRDSQLAL 470
           AVVADEVR+LA RTQ+ST EI  MIG +Q GT++A + M+ S   A++T+   R + +AL
Sbjct: 407 AVVADEVRALAHRTQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMAL 466

Query: 471 GKISQEVGAINAMNAQIASVSVQQSAAAEEVAQNVTRIHSSTVQSAAGSEQVENSNHELA 530
             I+  V  IN  N  IAS + +Q+  A EV +N+  I+  +VQSA G+ Q   ++ EL+
Sbjct: 467 DTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELS 526

Query: 531 ELADRLSTKVAFF 543
            LA  L+  VA F
Sbjct: 527 RLAVDLNGLVARF 539