Pairwise Alignments

Query, 546 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 568 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  267 bits (682), Expect = 9e-76
 Identities = 197/590 (33%), Positives = 303/590 (51%), Gaps = 89/590 (15%)

Query: 6   SLAMRIGLGFASTLSLLVLITAVGIQRVGFIDSTLKDVGEKAAVVQRYAINFRGSVHNRA 65
           ++  R+ LGF   L LL+ +T +G++ V  IDS L  + E  +V QRYAINFRGSVH+RA
Sbjct: 8   TIRTRLFLGFGVVLVLLISLTVIGVREVRKIDSDLTRINEVNSVKQRYAINFRGSVHDRA 67

Query: 66  IAIRDAVLVKDEAALNRHLAEIDQLKRDYQDSAVMLDRLFAN-TTASAEETRLLGDIKAI 124
           IA+RD VL  D A L+  LA+ID+L   Y+DSA  LD +FA  T    EE +LL  IK I
Sbjct: 68  IALRDVVLTTDPATLSLVLADIDRLAAFYEDSAKPLDAMFAGMTDIEPEERQLLASIKEI 127

Query: 125 ETQALASTERVINLRRSNDTAGAQDLLLAQASVHYTEWLKRVNALIDFEEAHIKQRLDTV 184
           E ++L + + VI  R++ND A AQ  L+  A   +TEWLKR+NA ID +E   +      
Sbjct: 128 EAKSLPAIKTVITARKANDMAAAQKGLMQDARPAFTEWLKRINAFIDLQEHKNQTIAARA 187

Query: 185 QSAAGTFAMLMVLASAVAIILS------VLVSLLIIRKV--------------------- 217
           +  A  F  LM+     A++++       + +L  +R++                     
Sbjct: 188 RDVAKGFQTLMLSLCGAALLMAGAFGLWTVAALRPLRRLTNAMLTLARGDLTVTVPASDS 247

Query: 218 KATLG-----------------------AEPEEVAEAIRRLADGELNQRIETRYPDSVMG 254
           K  +G                       AE E  AE  +R     L  R E    + V G
Sbjct: 248 KDEIGQITGAVEVFKANAVEADAFRRRQAEAEHAAEERKRAEMAALADRFE----NEVKG 303

Query: 255 ILKNALARLSDTISEVRSAAQALRHSSVTLLSVASDNRQ-QINLQTSEAQHVAAAITQMA 313
           ++ +  +  ++  +  +S A    H+     +VA+ + Q  +N+QT     VAAA  ++A
Sbjct: 304 VVDSVASSSTEVRALAKSLATTADHTETQATTVAAASEQASVNVQT-----VAAAAEELA 358

Query: 314 ASVSEVSGYASAASKATILADAEVDSGHRLVGEVTVSIEELATILDHATLRVNQVSSDSE 373
           AS+SE+                      R +GE +   ++ A   D     V+ +SS + 
Sbjct: 359 ASISEIG---------------------RQIGESSRKAKQAADQADGTNRIVDGLSSKAN 397

Query: 374 NIETVIEVINAIAAQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLATRTQESTQEIRD 433
            I  V+ +IN+IA QTNLLALNA IEAARAGE G+GFAVVA EV+SLA +T ++T +I  
Sbjct: 398 QIGDVVNLINSIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKSLANQTAKATGDISQ 457

Query: 434 MIGKLQSGTQDAADIMQRSRSLAQTTVTQTRDSQLALGKISQEVGAINAMNAQIASVSVQ 493
            I ++Q+ T DA + +Q   S+A T      +  + +G I+Q V   NA   +IA    Q
Sbjct: 458 QIAEIQTATADAVEAIQ---SIAAT----IGEVNVIVGTIAQAVDGQNAATMEIARNVQQ 510

Query: 494 QSAAAEEVAQNVTRIHSSTVQSAAGSEQVENSNHELAELADRLSTKVAFF 543
            +A   EV+ ++  +  +  ++ +G+ ++ +S+ EL++ A+ L T+V  F
Sbjct: 511 AAAGTNEVSSSIGGVLQAASETGSGASRLLSSSGELSKQAELLHTQVDRF 560