Pairwise Alignments

Query, 252 a.a., urea ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 253 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  156 bits (394), Expect = 4e-43
 Identities = 87/249 (34%), Positives = 141/249 (56%), Gaps = 6/249 (2%)

Query: 8   MKKPVLAIEGLTVSFDGFKAVDNLNLYIDRNEVRVVIGPNGAGKTTVLDLICGKTRATSG 67
           M   VL+  GL + F G  A +N+ + + R     +IGPNGAGKTT+++ + G    T G
Sbjct: 1   MSDTVLSTHGLVMRFGGITATNNVTMELKRGARHALIGPNGAGKTTLINQLTGVLTPTEG 60

Query: 68  SIQFDGQELTNMREYNIVRAGVGRKFQNPSIYENLTVFENLEMSYP----AGRKVWGALF 123
            I   G+++T +  +  V  G+ R FQ   +++++T  E L +       AG + W  L 
Sbjct: 61  RITLLGEDITKLAPHKRVARGLVRTFQINQLFDSMTPLETLALVVSQHQGAGAQWWRPLG 120

Query: 124 FKRNAQVIARVEEVAREIFLGDLLQQQADLLSHGQKQWLEIGMLLMQDPELLMLDEPVAG 183
             +   +  R  ++  +  L D+ +QQ   L++G+++ LEI + L  +P +L+LDEPVAG
Sbjct: 121 ASK--AITERAAQLLEQFHLSDVARQQVKHLAYGKRRLLEIAIALACEPRVLLLDEPVAG 178

Query: 184 MSVNERAQTAELLNRISQGRSVLVIEHDMEFVKSIAHKVTVLHQGKVLAEGSMASVQSNP 243
           +   ER +  + +  +    SVL+IEHDM+ V S A ++TVL  G +L EG   ++ ++P
Sbjct: 179 VPAGEREELLQTVAALPADVSVLLIEHDMDLVFSFADRMTVLVNGTLLTEGDPETIANDP 238

Query: 244 KVIEVYLGH 252
           KV EVYLGH
Sbjct: 239 KVKEVYLGH 247