Pairwise Alignments

Query, 252 a.a., urea ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  152 bits (385), Expect = 5e-42
 Identities = 88/253 (34%), Positives = 143/253 (56%), Gaps = 9/253 (3%)

Query: 8   MKKPVLAIEGLTVSFDGFKAVDNLNLYIDRNEVRVVIGPNGAGKTTVLDLICGKTRATSG 67
           M + +L + GL++ F G  AV+ + L +   +V  +IGPNGAGKTTV + + G  + + G
Sbjct: 1   MSREILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGG 60

Query: 68  SIQFDGQELTNMREYNIVRAGVGRKFQNPSIYENLTVFENLEMSY--PAGRKVWGALF-- 123
           +I  DGQ +  +  + I R GV R FQN  +++ +T  ENL ++         +  LF  
Sbjct: 61  TILLDGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALENLLIAQHRHLNTNFFAGLFKT 120

Query: 124 --FKRN-AQVIARVEEVAREIFLGDLLQQQADLLSHGQKQWLEIGMLLMQDPELLMLDEP 180
             F+R+  + + R +    ++ L +   + A  L++GQ++ LEI   +M  P ++MLDEP
Sbjct: 121 PSFRRSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLDEP 180

Query: 181 VAGMSVNERAQTAELLN--RISQGRSVLVIEHDMEFVKSIAHKVTVLHQGKVLAEGSMAS 238
            AG++  E      L+   R S   +VL+IEHDM+ V SI+  + V++QG  LA G+   
Sbjct: 181 AAGLNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTPEQ 240

Query: 239 VQSNPKVIEVYLG 251
           ++ NP VI+ YLG
Sbjct: 241 IRDNPDVIKAYLG 253