Pairwise Alignments

Query, 387 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  131 bits (330), Expect = 2e-35
 Identities = 106/334 (31%), Positives = 162/334 (48%), Gaps = 42/334 (12%)

Query: 17  IVLLALLILVVFPLTLDAFRLNMVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGVGGY 76
           ++L  L +L+  PL L +  L    + L +A  A+   L  GY G+LS GQG+FFG G Y
Sbjct: 17  MLLWVLAVLIGLPLILPSATL--ATEILIFAMAALACNLLLGYTGLLSFGQGIFFGAGAY 74

Query: 77  CMAMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPWLWQPFHSFSFTLAAVIAVPVLL 136
           C A+ +           I    G+                     F+  L A IA    L
Sbjct: 75  CAALLM-----------IHLQLGL---------------------FTALLGAAIAGG-FL 101

Query: 137 AFIIGMALFKRRVGDVYFSIVTQAIALILTVLIVGQQGLTGGVNGITDL---KTLLGWDL 193
           A ++G AL  RR G +YF ++T A + +   +       TGG NG+  +   +  LG  +
Sbjct: 102 ALLVG-ALAIRRTG-IYFVMLTLAFSQMAYFVAYTLSDWTGGDNGLLSVPRPEIRLGETV 159

Query: 194 RTDSAKMILYFINAGLLFGCIFIG-RFILASKLGRLLMAMRDKEERVRFSGYDVASFKIF 252
               A    ++    +LF  IFIG R ++AS  G  LMA+R+ E R    GYD   FKI 
Sbjct: 160 LLSLADARAFYAFVAVLFLLIFIGARRVIASPFGSTLMAIRENETRASAIGYDTRHFKIL 219

Query: 253 VFCVAAAFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGALLVNY 312
           VF ++ A + I GA++A+ + F+  S + ++ S  ++I   VGG  SL G++ GA  +  
Sbjct: 220 VFVLSGAVTGIAGALYAMLLHFVPLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGSIVL 279

Query: 313 GKTYFSESFPELWLYLMGGLFIAVVMYFPNGLAG 346
              + S+ +P  WL L+G + I VV++   GL G
Sbjct: 280 LGDFLSDLWPR-WLMLLGVILILVVIFMRGGLWG 312