Pairwise Alignments

Query, 387 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 648 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 90.9 bits (224), Expect = 9e-23
 Identities = 80/326 (24%), Positives = 145/326 (44%), Gaps = 47/326 (14%)

Query: 17  IVLLALLILVVFPLTLD-AFRLNMVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGVGG 75
           + +  +  L++FP+ +D  + ++++   + YA +  GL +  GY G +SLG    FG+G 
Sbjct: 15  LAIAGVAALLLFPIGIDNPYYIHLLETIMIYAILLFGLDIVVGYTGQVSLGHAGLFGLGA 74

Query: 76  YCMAMFL-KLEASDPESTKIQSTPGIPDFMDWNQITELPWLWQPFHS-FSFTLAAVIAVP 133
           Y   + + KL A                           W+  PF   F+    A++A+P
Sbjct: 75  YAAGVLVFKLSAPF-------------------------WITVPFAIVFTAGFGALLALP 109

Query: 134 VLLAFIIGMALFKRRVGDVYFSIVTQAIALILTVLIVGQQGLTGGVNGIT-DLKTLLGWD 192
            L            RV   Y ++VT A   I+ +LI     LT G  GI  +  +L G  
Sbjct: 110 AL------------RVSGPYLAMVTLAFGTIIQILINEMSFLTDGPMGIKLEKPSLFGHK 157

Query: 193 LRTDSAKMILYFINAGLLFGCIFIGRFILASKLGRLLMAMRDKEERVRFSGYDVASFKIF 252
           L         Y++ A L+   + +   IL S LGR   A+R         G  V  +K++
Sbjct: 158 LDDRE----YYWVVAVLMVLALVVVHRILRSHLGRAFEALRGSPVASDCMGVSVYRYKVY 213

Query: 253 VFCVAAAFSAIGGAMFALQVGFMSPSFVGIVPSIEMVIFAAVGGRMSLLGAVYGALLVNY 312
            F ++A F+ + G+++A    ++SP+      ++  ++   +GGR S +G++ GA ++  
Sbjct: 214 AFVISAGFAGLAGSLYAYSEQYISPNSYNFELTVLFLLAVIMGGRKSRIGSMLGATIIVL 273

Query: 313 GKTYFSESFPELWLYLMGGLFIAVVM 338
                 +    L+ Y+  GL +AV++
Sbjct: 274 LPKLLDDVV--LFRYVSVGLAVAVLV 297